Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0464
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    32   0.49 
U42438-5|AAM75369.1|  581|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U42438-4|AAM75371.1|  617|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    28   8.0  

>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 72  IDWRKGVRRSLSQNDVMSYFMEDVDLNTYMYYLHM 176
           ++W++   + L  N+V     E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217


>U42438-5|AAM75369.1|  581|Caenorhabditis elegans Hypothetical
           protein C09G4.2a protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +2

Query: 374 GDEMPVRQNNMVVATKDNLKMKQMMDDVEMMIREGILTGKSSVVTHCYKPEEVXDIENLA 553
           G  M V Q   V   KDN  ++ M D        G L G+ +++ HC +   V  IE+  
Sbjct: 70  GSIMYVIQEGKVQVVKDNRFVRTMED--------GALFGELAILHHCERTATVRAIESCH 121

Query: 554 VWS 562
           +W+
Sbjct: 122 LWA 124


>U42438-4|AAM75371.1|  617|Caenorhabditis elegans Hypothetical
           protein C09G4.2c protein.
          Length = 617

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +2

Query: 374 GDEMPVRQNNMVVATKDNLKMKQMMDDVEMMIREGILTGKSSVVTHCYKPEEVXDIENLA 553
           G  M V Q   V   KDN  ++ M D        G L G+ +++ HC +   V  IE+  
Sbjct: 106 GSIMYVIQEGKVQVVKDNRFVRTMED--------GALFGELAILHHCERTATVRAIESCH 157

Query: 554 VWS 562
           +W+
Sbjct: 158 LWA 160


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 305 DVKPMMWNEPLETGYWPKIRLPSGD 379
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 305 DVKPMMWNEPLETGYWPKIRLPSGD 379
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,984,012
Number of Sequences: 27780
Number of extensions: 282688
Number of successful extensions: 604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)