Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0463
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.4  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 180 HRXHPLPVQTRHAPVLRANPYS 115
           +R HPL + + H  +L  NP S
Sbjct: 332 NRCHPLSLSSDHQAMLHHNPMS 353


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 315 GSGSSPKRKTXFASVILNIYIFEAALY 235
           GSGS+          +L +YI E+ LY
Sbjct: 256 GSGSATPENNVSVVYVLILYILESLLY 282


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 158 SKPDTPRSSEP 126
           SKP TP S EP
Sbjct: 227 SKPGTPPSGEP 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,703
Number of Sequences: 336
Number of extensions: 2305
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)