Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0463
         (550 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    31   0.61 
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   0.61 
07_03_0078 - 13147741-13148913                                         28   4.3  
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480...    28   4.3  
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229...    27   9.9  

>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 171 HPLPVQTRHAPVLRANPYSEVTDPICRLPLPTNSI 67
           H L +  RH P L+A P S +    C+LPL +++I
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPLISSAI 141


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.1 bits (67), Expect = 0.61
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = -2

Query: 201 TNIDQTRH------RXHPLPVQTRHAPVLRANP 121
           T IDQ  H      + H +PVQ  H+PVL+ NP
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356


>07_03_0078 - 13147741-13148913
          Length = 390

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 307 SGPAFSGLPRIFLAVSRVGFVSCAI 381
           SGP + G  R+F+A+S +G ++ ++
Sbjct: 223 SGPIYKGRERVFIAISDIGMLAVSL 247


>06_03_0783 - 24546403-24546765,24547202-24547262,24547899-24548004,
            24548118-24551600,24553134-24553179
          Length = 1352

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 313  PAFSGLPRIFLAVSRVGFVSCAIITIL 393
            P FS  P  FL ++ + F+SC  +T+L
Sbjct: 1005 PGFSDSPSTFLRITGMEFISCPNLTLL 1031


>02_04_0221 -
           21021886-21022144,21022227-21022345,21022681-21022920,
           21023064-21023171,21023272-21023331,21023991-21024066,
           21024155-21024360,21024722-21024784,21024925-21025012,
           21025515-21026015,21027206-21027603
          Length = 705

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 149 DTPRS-SEPILIPKLRIQFADFPYLQILSTRGSSPWRPAADMGT 21
           D PRS S+P+ +P + +  +  P   I S++  S W+    +G+
Sbjct: 245 DDPRSPSQPLPLPPVPVASSSIPSSSITSSQFQSQWKRGKLLGS 288


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,841,347
Number of Sequences: 37544
Number of extensions: 291377
Number of successful extensions: 831
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)