Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0461
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   4.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   6.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.0  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 331 RARREKVEDE---DGDGANQLDDEEGTWSETFQSHHD 432
           +ARRE+ E E         Q   E+ T S   Q HHD
Sbjct: 74  QARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 110


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 331 RARREKVEDE---DGDGANQLDDEEGTWSETFQSHHD 432
           +ARRE+ E E         Q   E+ T S   Q HHD
Sbjct: 225 QARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 261


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 331 RARREKVEDE---DGDGANQLDDEEGTWSETFQSHHD 432
           +ARRE+ E E         Q   E+ T S   Q HHD
Sbjct: 284 QARREREEQERHKQQQQEKQQKIEQQTHSSIHQHHHD 320


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/38 (23%), Positives = 15/38 (39%)
 Frame = +1

Query: 379 QLDDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADH 492
           Q+  E+  W      HH   P  +   + +  FP+  H
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVH 74


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/38 (23%), Positives = 15/38 (39%)
 Frame = +1

Query: 379 QLDDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADH 492
           Q+  E+  W      HH   P  +   + +  FP+  H
Sbjct: 37  QMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVH 74


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 15/61 (24%), Positives = 23/61 (37%)
 Frame = +1

Query: 403 WSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVRRPYSCTTGRLRI 582
           +S T  +  +    GN    +  V  D   V  +PG R V    + V  P+     R  +
Sbjct: 35  FSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQEV 94

Query: 583 H 585
           H
Sbjct: 95  H 95


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 349 VEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSLD 468
           +E  DG+  NQ DD  G+      +H    P  ++A SL+
Sbjct: 642 MEAGDGNDGNQSDDNLGSCGSMGDAH---TPPEDDAESLN 678


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 349 VEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSLD 468
           +E  DG+  NQ DD  G+      +H    P  ++A SL+
Sbjct: 534 MEAGDGNDGNQSDDNLGSCGSMGDAH---TPPEDDAESLN 570


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,822
Number of Sequences: 336
Number of extensions: 3849
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)