Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0461
(752 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 65 1e-11
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 30 0.31
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 29 0.71
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 0.71
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 0.94
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 28 1.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.6
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 27 2.2
SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces pombe... 27 3.8
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 26 5.0
SPAC4G9.06c |||histone chaperone Chz1 |Schizosaccharomyces pombe... 26 5.0
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 5.0
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 5.0
SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosac... 26 6.6
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 26 6.6
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 26 6.6
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 26 6.6
SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|c... 25 8.8
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 8.8
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 25 8.8
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 8.8
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +1
Query: 250 FELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHH 429
F++EF ++GE VVLNE L +E R + + +++ +G W ETF + H
Sbjct: 175 FKVEF-QRDGEPQVVLNERHLLNMEYYRPKSSRTPEQEANGM---------WDETFDNFH 224
Query: 430 DSKPRGNEAVSLDVVFPDADHVYGIP 507
DSKP+G E+V LD+ F D +VYG+P
Sbjct: 225 DSKPKGPESVGLDIKFVDYGNVYGVP 250
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 30.3 bits (65), Expect = 0.31
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 29 HQKMWKYAFKLSALADGTFRVELDEADPLYP 121
H W YA KL L D + R E++E DP P
Sbjct: 935 HPLFWDYAKKLDFLIDVSDRFEVEERDPPSP 965
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 29.1 bits (62), Expect = 0.71
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = -3
Query: 195 PSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKA 49
PSS + F+PSA S AS V Y+ S SSSST V ++ N A
Sbjct: 163 PSSTPV-FSPSASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPA 210
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.1 bits (62), Expect = 0.71
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 380 SWMMRKELGVRPSSPI-----TTPNLGATKQFRSTLSSLMRITSTVYRAHGRFGLKTTTS 544
S++M K P +P +T N+G+T R++ S L R +S R H + G +T
Sbjct: 70 SFLMHKSTDENPDTPSNLDSPSTQNVGSTNNTRASQSLLRRSSSFFRRRHRKNGTHASTD 129
Query: 545 GD 550
+
Sbjct: 130 NN 131
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 0.94
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 240 VMMTLCPCVLTRITFPSSFEISFNPSAFGSPSNAS-C-VLYLGYRGSASS 97
+ +T+ P L R PS+ + F P GSP N C +L+L + SS
Sbjct: 1984 IFVTMNPGYLGRFKLPSNLKKLFRPIWMGSPDNKKICEILFLSFGFKESS 2033
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 361 DGDGANQLDDEEGTWSETFQSH--HDSKPRGNEAVSLDVVFPDADH 492
DG G + L D G+W+++ ++ +D GN + L V D H
Sbjct: 94 DGTGLSDLTDPPGSWTDSLLANMDYDILVAGNHELYLSTVANDTYH 139
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 204 ITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADNLKA 49
IT SS S + S+ SPS++S + S+SSSS+ S+S+ + K+
Sbjct: 147 ITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKS 198
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 170 IRLPSVLHPTPAASCILGIEDPLHRAPHG 84
I+LP+V P A CILG L RA HG
Sbjct: 52 IKLPNVPRPNMAI-CILGDAHDLDRAKHG 79
>SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 675
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 154 TEGRRIKT--DFERRWKSYSRQHARA*SHHNI---RTFELEFLDQNGEVAVVLNENSQLL 318
T +RI++ DFERRWK + + A H + R + E LD + +LN N +++
Sbjct: 262 THQKRIRSVSDFERRWKLWRSRLANL--RHVVKKHRDIDSEVLDDFVVLLDILNGNKEVI 319
Query: 319 V 321
+
Sbjct: 320 M 320
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 676 PYYNISSAXVQKPRRSACRHTDERIRNLCQYVFEDVQLYS 557
PY NI R ACR E++ + +F DV+ YS
Sbjct: 189 PYKNIKRWMRVVSDRPACRIAAEKVEDNTLTLFSDVERYS 228
>SPAC4G9.06c |||histone chaperone Chz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 113
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/48 (20%), Positives = 22/48 (45%)
Frame = +1
Query: 316 LVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAV 459
L+ + + V+ +D + + DD + + E + HD +P A+
Sbjct: 20 LIPDIDDEEDDVDFQDLSSSGESDDSDDSMQEDYDDIHDEEPEDYSAI 67
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 352 EDEDGDGANQLDDEEGTWSETFQSHHDSKPR 444
ED+D + ++ D EE + SE +S +D KP+
Sbjct: 370 EDDDENEEDEEDSEETSESEEDESVNDEKPQ 400
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 170 IRLPSVLHPTPAASCILGIEDPLHRAPHG 84
I+LP+V P + CILG L RA HG
Sbjct: 52 IKLPNVPRPNMSI-CILGDAHDLDRAKHG 79
>SPAC31G5.14 |gcv1|n313|glycine decarboxylase T
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 365 VMGLISWMMRKELGVRPSSPITTPNLGATKQFRSTLSSLMRITSTV 502
V ++ W +R E IT +L K F STLS+ T +
Sbjct: 71 VSHMVQWFVRGENATAYLESITPSSLKELKPFHSTLSAFTNETGGI 116
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 25.8 bits (54), Expect = 6.6
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +1
Query: 187 RRWK-SYSRQHARA*SHHNIRTF-ELEFLDQNGEVAVVLNE---NSQLLVEPL-RARREK 348
R WK S ++Q A H + T ++ DQN + ++ N Q + R R
Sbjct: 203 RAWKESKAKQEASKKEEHKLNTKPQVTAKDQNAMPSTGISGFEINRQKDTSDMKRNNRVH 262
Query: 349 VEDEDGDGANQLDDEEGTWSE 411
++DEDG L+D + W +
Sbjct: 263 MDDEDGPRRMNLEDYQELWDQ 283
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 89 VELDEADPLYPRYRTQLALDG 151
+ELD+ + LYP+Y Q DG
Sbjct: 107 LELDKLNKLYPKYNFQSCQDG 127
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 241 IRTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEE 396
IR+ +E+LD+ ++ V L E + + R VE + AN+ D +
Sbjct: 56 IRSKVIEYLDRAEKLKVYLQEKNNQISSKSRVSNGNVEGSNSPTANEALDSD 107
>SPBC16E9.07 |mug100||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 451 EAVSLDVVFPDADHVYGIPGTRTVWPEDDHVRR 549
+++ L+ VF +YG+ GT ++ DH+R+
Sbjct: 140 KSLILNKVFDYLFFLYGLSGTSILYTAGDHIRK 172
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.4 bits (53), Expect = 8.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 210 TRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADN 58
T T PSS S + S+ S S++S S+SSSS+ + S+S+ +
Sbjct: 150 TTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 200
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 525 PNRPCARYTVDVIRIREDNVERN 457
P CAR T+++ ++ N+ERN
Sbjct: 312 PITKCARETINIKNLKTSNLERN 334
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 322 EPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSK 438
E A E+ EDE+ D ++ D++E ++ HD +
Sbjct: 105 EEADANEEEEEDEEDDEEDEEDEDESGGGRRKRARHDRR 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,058,398
Number of Sequences: 5004
Number of extensions: 65083
Number of successful extensions: 250
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -