Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0461
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 51 9e-07
06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423 36 0.046
02_05_0068 - 25569066-25569311 30 2.3
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 30 2.3
11_08_0021 + 27716298-27716478,27717137-27717309,27717408-277175... 29 3.0
07_01_0694 - 5248381-5249118 29 5.2
05_03_0384 - 13361999-13362120,13362241-13362252,13362921-133629... 29 5.2
01_02_0110 + 11210174-11210292,11211635-11211752,11212426-112125... 29 5.2
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 28 6.9
08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271 28 6.9
02_05_0024 + 25152090-25153151,25153232-25154145,25154499-251547... 28 6.9
10_08_0518 + 18486315-18486462,18486495-18486712,18486763-184868... 28 9.2
07_01_0168 + 1179292-1180354,1180880-1180923 28 9.2
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 28 9.2
03_06_0137 - 31937541-31939892 28 9.2
01_06_1117 - 34633311-34634030,34634434-34634873,34635320-346353... 28 9.2
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 QLDDEEG-TWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIP 507
Q +EG TW E F+SH D++PRG ++++ DV F AD VYG+P
Sbjct: 189 QESKQEGETWEEQFRSHTDTRPRGPQSITFDVSFYGADFVYGLP 232
>06_01_0271 + 2009125-2009424,2009534-2009707,2010268-2010423
Length = 209
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 241 IRTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTW 405
IR E E +++ + +L++ L E + E+EDG+GAN ++EEG W
Sbjct: 145 IRFIEDESMERGSRILAILDK----LKEEREQQEGNEEEEDGEGANLSEEEEGDW 195
>02_05_0068 - 25569066-25569311
Length = 81
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 139 GVGWRTEGRRIKTDFER-RWKSYSRQHARA*SHHNIRTFELEFLDQNGEVAVVL 297
G+ WR + ER RW+ R HAR H++ ++ L F D VL
Sbjct: 27 GIYWRLRAGIRRMQSERGRWRGGRRDHARFSFHYDALSYALNFDDGRAAADFVL 80
>02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Frame = +1
Query: 91 GAR*SGSSIPKIQDAAGVGWRTEGRRIKTDFERRWKS--YSRQHARA*SHHNIRTFELEF 264
G R G S D AG + + + TD + +H + +R E+
Sbjct: 801 GGRGLGLSYSSGSDIAGDSGKADATEVSTDHSNHHQDTILDEEHRK-----KLRQIEIAV 855
Query: 265 LDQNGEVAVVLNENSQLLVEPLRARREKVEDEDG-----DGANQLDDEEGTWSETFQSHH 429
+ + N++ + + + + R +++ E G DGAN E T SE H
Sbjct: 856 MQYRESLEEKGLRNTEEIEKKVASHRRRLQSEYGLSFSNDGANSRRSSERTSSERRDRHD 915
Query: 430 DSKPRGNEAVS 462
DS + + ++S
Sbjct: 916 DSSRKRHRSLS 926
>11_08_0021 + 27716298-27716478,27717137-27717309,27717408-27717578,
27717967-27718077,27718168-27718245,27718642-27718832,
27718873-27718958,27719202-27719206,27719301-27719378,
27719465-27719527,27719597-27719680,27720049-27720209,
27720377-27720416,27720774-27720893,27720993-27721211,
27721927-27722100,27722202-27722883,27722986-27723185,
27723269-27723407,27723502-27723677
Length = 1043
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 316 LVEPLRARREKVED-EDGDGANQLDDEEGTWSETFQSHHDS 435
L+E +E ED +DGDGA LDD++ +T + DS
Sbjct: 901 LMESCIHLKEVQEDGDDGDGAEDLDDDDEEEEDTDEDDEDS 941
>07_01_0694 - 5248381-5249118
Length = 245
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 247 TFELEFLDQNGEVAVVLNENSQLLVEPLRARREK--VEDEDGDGANQLDDEEGT 402
TF+L+ L+ + ++N S LL E L A E ++E+G+ A + +EEGT
Sbjct: 189 TFDLDELEGREKGPPMVNPKSVLL-ESLAAEMEDDVAKEEEGEEAKKKKEEEGT 241
>05_03_0384 -
13361999-13362120,13362241-13362252,13362921-13362981,
13363049-13363202,13364653-13364788,13365020-13365290,
13365654-13365962
Length = 354
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 437 NLGATKQFRSTLSSLMRITSTVYRAHGRF--GLKTTTSG 547
++G K+F++ ++ R+T+ +YR HGR ++ TSG
Sbjct: 34 DIGKLKEFKNPIARAKRVTTFIYR-HGRLLSAMREKTSG 71
>01_02_0110 + 11210174-11210292,11211635-11211752,11212426-11212522,
11212991-11213080,11213174-11213280,11213765-11213887,
11214055-11214208,11214582-11214642,11214748-11215103,
11216535-11218056,11218169-11218415
Length = 997
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 388 DEEGT--WSETFQSHHDSKPRGNEAVSLDVVFPDADHVY 498
DE GT SE S HD KP +A S DV+ P + ++
Sbjct: 925 DEAGTKSLSEEQSSAHDGKPDTEDADSKDVLLPGVNLIF 963
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 367 DGANQLDDE-EGTWSETFQSHHD--SKPRGNEAVSLDVV 474
DG N++D E T E QSHHD + N A+ D+V
Sbjct: 411 DGENKVDMRIEATVEEKHQSHHDRYRQKNPNSAIHADIV 449
>08_01_0280 + 2283046-2283532,2285406-2285629,2286630-2287271
Length = 450
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/23 (39%), Positives = 20/23 (86%)
Frame = +2
Query: 179 ISKDDGKVILVNTQGHKVIITSE 247
+S DD +++L++++G KV++TS+
Sbjct: 351 MSIDDERIVLLDSRGEKVVVTSD 373
>02_05_0024 +
25152090-25153151,25153232-25154145,25154499-25154709,
25154757-25154921
Length = 783
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 307 SQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAV---SLDVVF 477
+++ + PLRA + +EDG A + ++ ++++T + D+ G +V + +F
Sbjct: 88 ARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTL-TQSDANNGGGFSVPRYCAETIF 146
Query: 478 PDADHVYGIPGTRTVWPEDDH 540
P D+ P +TV +D H
Sbjct: 147 PRLDYA-ADPPVQTVVAKDVH 166
>10_08_0518 +
18486315-18486462,18486495-18486712,18486763-18486808,
18487436-18487709,18487797-18488052
Length = 313
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +1
Query: 343 EKVEDEDGDGANQLDDEEG---TWSETFQSHHDSKPRGNEA--VSLDVVFPDADHVYGIP 507
E +ED D + L ++ G ++S H +KP G+ V + VV + D+V+ IP
Sbjct: 201 EWFSEEDLDVYSSLYEKSGFRYPLQMPYRSMHQNKPIGDAKFQVPVFVVMGEKDYVFKIP 260
Query: 508 GTRTV 522
G +V
Sbjct: 261 GIESV 265
>07_01_0168 + 1179292-1180354,1180880-1180923
Length = 368
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = +1
Query: 352 EDEDGD---GANQLDDEEGTWSETFQSHHD 432
ED+DG+ A+ E GTW+ HHD
Sbjct: 170 EDDDGEEIASASSYSSETGTWTAASTVHHD 199
>06_03_0606 -
22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/63 (20%), Positives = 29/63 (46%)
Frame = +1
Query: 445 GNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVRRPYSCTTGRLRIHIDTDCVYARPYXD 624
G+++VS++V D D + + ED RP+ T ++ ++ C + + +
Sbjct: 258 GHDSVSVEVNRDDVDEEASVEQYDVEFAEDSDDDRPFPPLTNNAKLALEECCAFEKVFGR 317
Query: 625 TPN 633
P+
Sbjct: 318 KPD 320
>03_06_0137 - 31937541-31939892
Length = 783
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 45 NMPSSYQRWPMARSVWSSMKRILYTQDTGRSWRWMENR 158
N+ S+ RW A +W + K ++TG SW + ++
Sbjct: 622 NVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSK 659
>01_06_1117 -
34633311-34634030,34634434-34634873,34635320-34635370,
34635522-34635642
Length = 443
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 277 GEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEA 456
G+ +V+NE + E + + +DE D D+ EG S S D NE
Sbjct: 118 GQDDLVVNEIGMAIAEVMHVCSDHDDDEGTDSGEDFDENEGLLSLESDSTDDVVDIDNEL 177
Query: 457 V 459
V
Sbjct: 178 V 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,341,133
Number of Sequences: 37544
Number of extensions: 451516
Number of successful extensions: 1556
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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