Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0461
         (752 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)              65   5e-11
SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_20018| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)            29   5.4  
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.4  
SB_52148| Best HMM Match : EGF (HMM E-Value=0)                         28   7.1  
SB_13995| Best HMM Match : ASC (HMM E-Value=0.0034)                    28   7.1  
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)                    28   9.4  
SB_12458| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_7681| Best HMM Match : Annexin (HMM E-Value=0)                      28   9.4  
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.4  

>SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)
          Length = 663

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = +1

Query: 343 EKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIP 507
           E+ + E+         EEG W E F+ HHDSKPRG  +V LD+ FP  +HVYGIP
Sbjct: 209 EEQKQEEEKVVEDEKHEEGMWEENFKEHHDSKPRGPSSVGLDISFPGVEHVYGIP 263



 Score = 31.9 bits (69), Expect = 0.57
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 59  LSALADGTFRVELDEADPLYPRYRTQLALDGEPK 160
           LS L   T R +++E  P+ PRY  + AL  EPK
Sbjct: 77  LSTLEKNTARFKINELKPIRPRYEVKDALKTEPK 110


>SB_16495| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 851

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 9   CNFYVNNIK-KCGNMPSSYQRWPMARSV-WSSMKRILYTQDTGRSWRWM 149
           C+  V + K KCGN+P S+  +     + WS+ + +LY   T R  +++
Sbjct: 587 CDVIVLSYKRKCGNVPPSHVAYTFKEKISWSAGRNLLYYLSTSRQKQYL 635


>SB_20018| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 271

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 256 LEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDS 435
           LE +D++GEV V   E  + + +  R    ++EDE  D  N  DDE    + T +     
Sbjct: 28  LEDIDEDGEVKVKTKEKKKTVTKKKRKGGIQLEDEVDDDDND-DDEVDLDATTAEELAKK 86

Query: 436 KPRGNEA 456
           K    EA
Sbjct: 87  KKEKEEA 93


>SB_14204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 343 EKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNE 453
           EK  DE  +G N+  +EEG   E    + +    GNE
Sbjct: 20  EKGNDEVNEGGNEEGNEEGNEEENEDGNEEENEEGNE 56


>SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)
          Length = 625

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 26/93 (27%), Positives = 39/93 (41%)
 Frame = +1

Query: 151 RTEGRRIKTDFERRWKSYSRQHARA*SHHNIRTFELEFLDQNGEVAVVLNENSQLLVEPL 330
           R     I+ +  RR K Y  Q ARA S    R    ++ D+ G  A     N+     P+
Sbjct: 298 RRASSAIENEHARRNK-YGHQKARAKSAMGERNSRGDYEDRKGNDARS-GINTGCTFSPV 355

Query: 331 RARREKVEDEDGDGANQLDDEEGTWSETFQSHH 429
           R++ + V     DG  +  +EE  +S  F   H
Sbjct: 356 RSKDKNVRS---DGQGEQKEEETQYSRLFSDTH 385


>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +1

Query: 274 NGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLD-DEEGTWSETFQSHHDSKPRGN 450
           NG  A+++++   +   P ++      D+D  G    D DEE T SE+       K   +
Sbjct: 80  NGLTALLISDTDTVTTRPPQSSSHSETDDDDSGEESGDEDEEKTESESDDDDKTEKYSDD 139

Query: 451 EA-VSLD 468
           E+ VS+D
Sbjct: 140 ESDVSMD 146


>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1055

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
 Frame = -3

Query: 219 CVLTRITFPS-SFEISFNPSA---FGSPSNASCVLYLGY 115
           CV    TF   +F   FN      F  P NASCVL++GY
Sbjct: 620 CVGVNSTFHCVNFTSGFNDKVQMKFNVPINASCVLHVGY 658


>SB_13995| Best HMM Match : ASC (HMM E-Value=0.0034)
          Length = 610

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 310 QLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVS 462
           QL    L+   +K  D+D D  +  DD+E T S  FQ    +     E VS
Sbjct: 384 QLGNSDLKESFKKFADDDDDDDDDDDDDEPTTSANFQPTSTANSNNTEPVS 434


>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 618

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +1

Query: 301 ENSQLLVEPLRARREKVEDED-----GDGANQLDDEEGTWSETFQSHHDSKPRG 447
           E++ +  +  + R + VE ED     GD     + + G +++T    HDSK RG
Sbjct: 430 ESNDVECKDSKERNDDVECEDSEKGRGDSEESYNAQGGFFTQTSDGKHDSKQRG 483


>SB_12458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 149

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 610 ERIRNLCQYVFEDVQLYSCTVAGRGRLQAKP 518
           E ++ L   VF + +L  CT+ G+GR +  P
Sbjct: 75  EGVKRLLSDVFTEEELMRCTLKGKGRSRGMP 105


>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 426

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +1

Query: 301 ENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRG 447
           E++    +P+   RE+ E+ D  G +  ++E G      + HH+ + RG
Sbjct: 282 EDALKRAQPIENGRERKEEADPPGQHHEEEERGVHPP--EQHHEEEERG 328


>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = +1

Query: 193 WKSYSRQHARA*SHHNIRTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDG 372
           W   +  H    S H   T + E  ++N EV   +   S  + + L       E+EDG  
Sbjct: 111 WVRQADPHVEKYSEH---TTDSEPSEENTEVVPAITAESSTISQSLVVSYSSSEEEDG-- 165

Query: 373 ANQLDDEEGTWSETFQSHHDSKPRGNE 453
             +++ E+ + + +  S +DSK R +E
Sbjct: 166 --EIESEDNSLNNS-HSENDSKNRVSE 189


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,352,660
Number of Sequences: 59808
Number of extensions: 521861
Number of successful extensions: 1749
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)