Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0461
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 51 8e-07
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical pr... 30 2.0
U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 6.2
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 28 6.2
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 28 6.2
AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal sr... 28 6.2
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 28 6.2
AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein. 28 6.2
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 28 8.2
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 8.2
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 8.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 8.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 8.2
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +1
Query: 385 DDEEGTWSETFQSHHDSKPRGNEAVSLDVVFPDADHVYGIP 507
D E+G W ETF+ D+KP G+ +V +D+ F A HV+GIP
Sbjct: 171 DREKGFWEETFKEIKDTKPHGSSSVGVDIAFVGAKHVFGIP 211
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 244 RTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQS 423
+ F + ++ E+ LN + +L VE R + E E EG W E F+
Sbjct: 142 KPFLVSIFNEFDELVAQLNRDGKLKVEEFRTKEEGKEYP-----------EGFWEERFKG 190
Query: 424 HHDSKPRGNEAVSLDVVFPDADHVYGIP 507
D K G+ +V +D+ F + YG+P
Sbjct: 191 FTDHKQHGSSSVGVDISFVNFKTAYGLP 218
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 244 RTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSETFQS 423
+ F + ++ E+ LN + +L VE R + E E EG W E F+
Sbjct: 156 KPFLVSIFNEFDELVAQLNRDGKLKVEEFRTKEEGKEYP-----------EGFWEERFKG 204
Query: 424 HHDSKPRGNEAVSLDVVFPDADHVYGIP 507
D K G+ +V +D+ F + YG+P
Sbjct: 205 FTDHKQHGSSSVGVDISFVNFKTAYGLP 232
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -3
Query: 543 DVVVFRPNRPCARYTVDVIRIREDNVERNCFVAPRFGVVMGLEGLTP 403
D+ + N C VD+ + R D VERNC R V+GL L P
Sbjct: 1099 DLPMIMDNIRCEENEVDITKCRHDGVERNCAAGCRSTEVVGLRCLEP 1145
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 35.1 bits (77), Expect = 0.054
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 12 NFYVNNIKKCGNMPSSYQRWPMARSVWSSMKRILYTQDTGRSWRWMENR 158
N Y+ N KK N P S++ M + S+ K I+ R+ RWM+NR
Sbjct: 308 NQYLENFKKTENRPHSHEEKGMMQIEKSNYKDIIIKLFESRTERWMKNR 356
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical protein
M03C11.8 protein.
Length = 989
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 307 SQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSE 411
S+LL + R + VED+ GD N +D EE E
Sbjct: 931 SKLLSSAISGRYDDVEDDSGDSKNGIDAEEAAKKE 965
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 307 SQLLVEPLRARREKVEDEDGDGANQLDDEEGTWSE 411
S+LL + R + VED+ GD N +D EE E
Sbjct: 931 SKLLSSAISGRYDDVEDDSGDSKNGIDAEEAAKKE 965
>Z81051-8|CAB02869.1| 425|Caenorhabditis elegans Hypothetical
protein C55A6.9 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 337 RREKVEDEDGDGANQLDDEEGTWSETFQ--SHHDSKPRGNEAVSLDVVFPDADH 492
+ ++VED D +Q+D T+ + + H SK +G +AV VFPD DH
Sbjct: 153 KNQQVEDMYRDKQSQIDAINKTFEDVRKPVKEHYSK-KGVKAVEESFVFPDFDH 205
>U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical
protein R05G6.9 protein.
Length = 378
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -3
Query: 219 CVLTRITFPSSFEISFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASADN 58
C T + S + S N G+ + +C YLGY G T + AS N
Sbjct: 209 CEKTPVALCDSRDCSSNGLCIGTKDSMTCACYLGYSGDKCEKITGTMCEASDCN 262
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 297 ENDRYFSILVQEFEFKGSDV-MMTLCPCVLTRITFPSSFEISFNPSAFGSPSNASCVLYL 121
E DR + +Q+ + + +++ + TL P + + SS + F S SP++ S
Sbjct: 223 EKDRDYKEWMQKEKDRETELGLETLYPTTSSSSSAQSSAQSEFRRSVAPSPTSTSTTT-- 280
Query: 120 GYRGSASSSSTRNVPSASA 64
YR + SS+TR S+SA
Sbjct: 281 PYRSNRYSSATRGGNSSSA 299
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 274 NGEVAVVLNENSQLLV-----EPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDS 435
N +V +LNE + + + + +EK E+E+ A + EEG +T SHHD+
Sbjct: 662 NQKVKKLLNELDKFVTPFECYQMMMITKEKQEEEERKEAERKKLEEGDLPKTMFSHHDA 720
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 413 PSSPITTPNLGATKQFRSTLSSLMRITSTVYRAHGRFGLKTTTSGDRT 556
PSS +TP+ A+ ST SS TST ++ +TTTS D T
Sbjct: 503 PSSSSSTPSSTASSSVSSTASSTQSSTST-QQSSTTTKSETTTSSDGT 549
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 413 PSSPITTPNLGATKQFRSTLSSLMRITSTVYRAHGRFGLKTTTSGDRT 556
PSS +TP+ A+ ST SS TST ++ +TTTS D T
Sbjct: 503 PSSSSSTPSSTASSSVSSTASSTQSSTST-QQSSTTTKSETTTSSDGT 549
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 274 NGEVAVVLNENSQLLV-----EPLRARREKVEDEDGDGANQLDDEEGTWSETFQSHHDS 435
N +V +LNE + + + + +EK E+E+ A + EEG +T SHHD+
Sbjct: 662 NQKVKKLLNELDKFVTPFECYQMMMITKEKQEEEERKEAERKKLEEGDLPKTMFSHHDA 720
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 439 PRGNEAVSLDVVFPDADHVYGIPGTRTVWPE-DDHVRRPYSCTTGRLRIHIDTDCVYARP 615
P + V D F A H+ P + V P D +RP C G I TDC+ A
Sbjct: 408 PHDHMCVQGDGSFGAARHLCCKPRKKCVIPYVDPDKKRPIRCFPGDQSCPISTDCLPALE 467
Query: 616 YXDTPNDVASAXSPN-*CCNT 675
++ +++ +A CC+T
Sbjct: 468 NSESFSNLTNAIDVMFFCCHT 488
>AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal src
kinase protein 1 protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 412 TFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVR 546
T ++ D GN+ + V P + +G+P V+ +DDHVR
Sbjct: 34 TLNANRDLLSPGNDVIVTRTVSPSF-YSHGMPARDNVFRKDDHVR 77
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 205 SRQHARA*SHHNIRTFELEFLDQNGEVAVVLNENSQLLVEPLRARREKVEDED-GDGANQ 381
S+ AR N R FE++F D+ G + E S++L + L E +DED D
Sbjct: 283 SKADARKVQAKNSR-FEVKFDDEGGLIDEDTVEKSRILKKNLDGSDESDDDEDLEDEEED 341
Query: 382 LDD 390
LDD
Sbjct: 342 LDD 344
>AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 412 TFQSHHDSKPRGNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVR 546
T ++ D GN+ + V P + +G+P V+ +DDHVR
Sbjct: 34 TLNANRDLLSPGNDVIVTRTVSPSF-YSHGMPARDNVFRKDDHVR 77
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 334 ARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGN 450
A R++V D DGD N++++ G + Q D R N
Sbjct: 74 ASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTN 112
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 340 REKVEDEDGDGANQLDDEEGTWSETFQSHHDS 435
+EK E+E+ A + EEG +T SHHD+
Sbjct: 407 KEKQEEEERKEAERKKLEEGDLPKTMFSHHDA 438
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 177 SFNPSAFGSPSNASCVLYLGYRGSASSSSTRNVPSASA 64
S NP FG PS++S + +++SSST PS++A
Sbjct: 1044 STNPPMFGGPSSSSIPAF----STSNSSSTSGFPSSTA 1077
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 92 ELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQGHKVIITSEPLNSNSWT 271
E +EA P P + +DGEP + + + DG VI N++G + + L N +
Sbjct: 7569 EEEEATPAIPF----IIIDGEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEYG 7624
Query: 272 RMEK*RSFST 301
K + T
Sbjct: 7625 EFVKPKEADT 7634
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 92 ELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQGHKVIITSEPLNSNSWT 271
E +EA P P + +DGEP + + + DG VI N++G + + L N +
Sbjct: 7614 EEEEATPAIPF----IIIDGEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEYG 7669
Query: 272 RMEK*RSFST 301
K + T
Sbjct: 7670 EFVKPKEADT 7679
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 92 ELDEADPLYPRYRTQLALDGEPKADGLKLISKDDGKVILVNTQGHKVIITSEPLNSNSWT 271
E +EA P P + +DGEP + + + DG VI N++G + + L N +
Sbjct: 7614 EEEEATPAIPF----IIIDGEPINEDDGVYTDKDGNVIPTNSEGKPIDENGQVLPKNEYG 7669
Query: 272 RMEK*RSFST 301
K + T
Sbjct: 7670 EFVKPKEADT 7679
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,845,790
Number of Sequences: 27780
Number of extensions: 368783
Number of successful extensions: 1255
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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