Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0461
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              27   0.14 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   7.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = +1

Query: 430 DSKPRGNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVRRPYSCTTGRLRIHIDTDCVYA 609
           + + RGN    +  V  D   V  +PG R V P  + V  P+     R  +H       A
Sbjct: 24  ECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLA 83

Query: 610 R 612
           R
Sbjct: 84  R 84


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 337 RREKVEDEDGDGANQLDDEE 396
           R  K    DG+GA+  DD+E
Sbjct: 265 RLRKRRQNDGEGADDRDDDE 284


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 436 KPRGNEAVSLDVVFPDADHVYGIPGTRTVWPEDDHVRRPY 555
           +PR +E  S DV+    +HV G+ G    W    +V   Y
Sbjct: 523 RPR-HEIRSTDVIPGTQEHVCGVKGIPCSWGRAINVANRY 561


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 295 LNENSQLLVEPLRARREK 348
           +NENS+LL + L+A  E+
Sbjct: 210 INENSELLFKELQAAYEE 227


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 129 GRSWRWMENRRQ 164
           G +W+W E R+Q
Sbjct: 170 GSAWQWNEERKQ 181


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 331 RARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSL 465
           RAR+ ++         + DD E + S     +  S PR +   SL
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 331 RARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSL 465
           RAR+ ++         + DD E + S     +  S PR +   SL
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 331 RARREKVEDEDGDGANQLDDEEGTWSETFQSHHDSKPRGNEAVSL 465
           RAR+ ++         + DD E + S     +  S PR +   SL
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHAKPSL 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,981
Number of Sequences: 438
Number of extensions: 4798
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)