Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0458
         (705 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.7  
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)             28   8.5  
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  

>SB_20535| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 633 GVVTGTLFDWSCGFYIWR 686
           G+VT + F+W C F +WR
Sbjct: 177 GIVTSSTFEWLCCFIVWR 194


>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 561

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -2

Query: 134 AVILETNSDETVLFI**I-NISTCVSCDSMDPQINSLELFLWR 9
           AVI+E N+D T+ F+  I NI   + CD     I++++ F+ R
Sbjct: 103 AVIIEPNADGTLPFLENIKNIKAVICCDQFPGVISAVQGFIHR 145


>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2346

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 211  LTKTKLQLHSVSKLPDLPSLAGTTVSCFGFKYPGPPSLKL 330
            LT  K   +S+   PDLP          G K PG P LKL
Sbjct: 2121 LTGPKAPGYSIQNHPDLPGNGNQAADLTGPKAPGYPILKL 2160


>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
          Length = 3810

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 564 GGRNRIRTKNWXSKCNLGRVHAAGVVTGTLFDWSCGFY 677
           GG+NRIR+ N  ++C  G    +G  T        GFY
Sbjct: 270 GGQNRIRSANECTQCRAGSYCESGNQTTVTGPCDPGFY 307


>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 739

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 650 CAGHDAGRVNASQITLGGPIF 588
           CAG DAG V+A Q   GGP++
Sbjct: 495 CAGLDAGGVDACQGDSGGPMY 515


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,190,357
Number of Sequences: 59808
Number of extensions: 432704
Number of successful extensions: 806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)