Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0458
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.3  
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           24   4.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.4  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   9.4  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 516 EQALNSSSGRIPYCLLWRSNYWW-GVNASIQR 424
           ++A +++  R+     WR  YWW  V A ++R
Sbjct: 258 DKACDATMSRLKKTCRWRGVYWWTSVIADLRR 289


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 650 CAGHDAGRVNASQITLGGPIFGSD 579
           CAG+  G  +A Q   GGP+   D
Sbjct: 215 CAGYQQGGKDACQGDSGGPLVAED 238


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 67   HVLIFIY*INKTVSSELVSNMTA 135
            ++ IF+  + K V  ELVSN+T+
Sbjct: 1448 YISIFVCFVTKAVHIELVSNLTS 1470


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 80  NISTCVSCDSMDPQINSLELF 18
           N++T +SC S DP+++    F
Sbjct: 600 NVTTALSCISYDPEVDQAMQF 620


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 260  YPHWLAPQFPVSVSNI 307
            Y HW+AP  P+  +NI
Sbjct: 1944 YGHWVAPPSPMVRANI 1959


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 653 QCAGHDAGRVNASQITLGGPIFGSDAVPTP 564
           Q AGH    V+    T+  P+F    VP P
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVGVPVP 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,546
Number of Sequences: 2352
Number of extensions: 14907
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)