Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0458
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.8  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   2.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 173 NFM*FQRDSGFLF*PKLNCSCIAYLNFQIYPH 268
           +++   +D   L+  KL       +NF IYPH
Sbjct: 141 HYLWLYKDKTILYMVKLTLKLSCAMNFLIYPH 172


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -2

Query: 497  HPAGFHTVYCGGQTIGGALTPRFNASKPVT 408
            H  G+ ++Y   QT+   +   +  +KP++
Sbjct: 930  HAGGWQSIYAQPQTVQDQIVSEYYQNKPIS 959


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 230 CNLVLVKKENHCPFEIT*NFNKNT 159
           C+L + K++N  P   + N N N+
Sbjct: 519 CSLAVAKQQNQVPLTSSSNVNNNS 542


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 347 FIMNY*SFNDGGPGYLKPKQETVVPASEGRSGS 249
           FI    SF++  P YL PK + VV +S  R G+
Sbjct: 29  FISGTSSFHEMRPDYLLPK-DVVVVSSNYRVGA 60


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 465 RSNYWWGVNASIQRL*TSDT 406
           R ++W  +N +  +L TSDT
Sbjct: 543 REDFWNSINFNENKLHTSDT 562


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 465 RSNYWWGVNASIQRL*TSDT 406
           R ++W  +N +  +L TSDT
Sbjct: 543 REDFWNSINFNENKLHTSDT 562


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,509
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)