Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0456
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +2

Query: 248 WEEASRCPSRRLKWTRQKPVKCALRSRPPE 337
           W++ S   + +L +T ++P     +S PP+
Sbjct: 26  WQQTSNLTTSKLLYTYRQPYPRQKKSHPPQ 55


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 547 NFWHKLVFGFKQNY 506
           +FWH+    F +NY
Sbjct: 128 DFWHRYTLSFIENY 141


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 327 RDLNAHFTGFWRVHFNLLD 271
           R +NAH +G   V  NLLD
Sbjct: 55  RYMNAHLSGIQLVVRNLLD 73


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 272 SRRLKWTRQKPVKCALRSRPPESAIL 349
           S R  W R +PV   L +R  + A L
Sbjct: 70  SNRPWWERYQPVSYILNTRSGDEAAL 95


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 673 LIVSCCW 693
           LIV+CCW
Sbjct: 9   LIVACCW 15


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 272 SRRLKWTRQKPVKCALRSRPPESAIL 349
           S R  W R +PV   L +R  + A L
Sbjct: 71  SNRPWWERYQPVSYILNTRSGDEAAL 96


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 74  VKVITYLLNLSYRILIF 124
           + VITY+LNL+   L++
Sbjct: 249 IVVITYVLNLTDLFLVY 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,542
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)