Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0454
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0UKN2 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21; Eukar...    35   2.1  
UniRef50_Q2UM85 Cluster: Predicted protein; n=1; Aspergillus ory...    34   3.7  
UniRef50_A0VCC5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q10Z71 Cluster: Peptidase M23B; n=1; Trichodesmium eryt...    33   6.5  
UniRef50_Q0UKP4 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   6.5  
UniRef50_A3LN53 Cluster: Predicted protein; n=1; Pichia stipitis...    33   6.5  
UniRef50_A7DPM0 Cluster: Wyosine base formation; n=1; Candidatus...    33   6.5  
UniRef50_Q4RMS9 Cluster: Chromosome 3 SCAF15018, whole genome sh...    33   8.6  

>UniRef50_Q0UKN2 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 391

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
 Frame = +2

Query: 188 CAGIHAKCQGRCSSAY*HRPACIASIVPLNSVEIYEESPTRTPGTSVTASKLLPLYRARG 367
           C+G  A   GRCS+       CI + V   S +     P  T    V   +  P+Y A G
Sbjct: 119 CSGFEATEDGRCSNCMRFNQDCIFTPV---SAQTQAFVPAHTVWRGV--GQPPPMYGAYG 173

Query: 368 YYGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAEP-P-----GPSIVPHNHAPRK 514
              P P     + Y    P +     YLP+  A P P     GP   PH+ A R+
Sbjct: 174 Q--PLPPASHAEAYGQQPPQQPRQQGYLPSPTAGPYPVHSEYGPPGAPHDEAGRE 226


>UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21;
           Eukaryota|Rep: Early nodulin 75 precursor - Glycine max
           (Soybean)
          Length = 309

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 29/94 (30%), Positives = 35/94 (37%)
 Frame = +2

Query: 290 YEESPTRTPGTSVTASKLLPLYRARGYYGPTPTDWEDQEYDLVAPHEASDSSYLPTAFAE 469
           YE  P   P T        P Y+   YY P P      EY    PHE +   YLP    +
Sbjct: 33  YEPPPIEKPPTYEPP----PFYKPP-YY-PPPVHHPPPEYQ--PPHEKTPPEYLPPPHEK 84

Query: 470 PPGPSIVPHNHAPRKLKL*R*X*RHEKRLYEKQP 571
           PP   + PH   P + +       HE    E QP
Sbjct: 85  PPPEYLPPHEKPPPEYQPPHEKPPHENPPPEHQP 118


>UniRef50_Q2UM85 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 428

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
 Frame = +2

Query: 242 RPACIASIVPLNSVEIYEESPTRTPGTSVTASKLLP----LYRARGYYGPTPTDWEDQEY 409
           RP  + S    N        P RT GT+VT+S   P     Y AR   GP+P    +Q Y
Sbjct: 169 RPRRMPSAPRPNGAGYMGPPPVRT-GTAVTSSSFYPDDQSAYHARSPGGPSPISPYEQPY 227

Query: 410 DLVAPHEASDSSYLPTAFAEPPGPSIVP 493
              +    S   Y+P   A  P     P
Sbjct: 228 GDYSQAYGSQPHYMPIGTAVSPSAEAGP 255


>UniRef50_A0VCC5 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 581

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = +2

Query: 242 RPACIASIVPLNSVEIYEESPTRTPGTSVTASKLLPLYRARGYYGPT----PTDWEDQEY 409
           R A +A+ +      I E++ TR    +V   +LL L   R ++       P + E Q  
Sbjct: 393 RSAAVAAAIDSMKQAIGEDAATRASLDAVL-QQLLGLAARRDFWQQADYAAPEEGEHQAR 451

Query: 410 DLVAPHEASDSSYLPTAFAEPPGPSIVPHNH 502
            L+A  E +D SY        PG  IVPHNH
Sbjct: 452 YLIA--EDADQSYALYLNVMRPGKRIVPHNH 480


>UniRef50_Q10Z71 Cluster: Peptidase M23B; n=1; Trichodesmium
           erythraeum IMS101|Rep: Peptidase M23B - Trichodesmium
           erythraeum (strain IMS101)
          Length = 687

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 281 VEIYEESPTRTPGTSVTASKLLPLYRARGYYGPTPTDWEDQEYDLVAPHEASDSSYLPTA 460
           +E+Y+  P+  P      S   P Y    YY P P+ +  + Y   AP  + +  Y P  
Sbjct: 66  IEVYDYDPSYQPAPVPQTSYSAPSYSPEPYYSPAPS-YSPEPYYSPAPSYSPEPYYSPAP 124

Query: 461 FAEP 472
              P
Sbjct: 125 SYSP 128


>UniRef50_Q0UKP4 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 576

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 386 TDWEDQEYDLVAPHEASDSSYLPTAFAEPPGPSIVPHNHAPRKLKL 523
           T+WED+ YD   P+E++     P A    P P   P   AP+++ +
Sbjct: 312 TNWEDEGYD---PYESTAYDPAPMAMGTSPHPPAYPPREAPQQMTM 354


>UniRef50_A3LN53 Cluster: Predicted protein; n=1; Pichia stipitis|Rep:
            Predicted protein - Pichia stipitis (Yeast)
          Length = 1660

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 4    KHSNVITINNKLLPFWLYQQSSPFK 78
            KH+N++ +NN  + FW Y   SP K
Sbjct: 1050 KHNNILNLNNLAINFWKYMNFSPIK 1074


>UniRef50_A7DPM0 Cluster: Wyosine base formation; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Wyosine base
           formation - Candidatus Nitrosopumilus maritimus SCM1
          Length = 341

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 35/140 (25%), Positives = 51/140 (36%)
 Frame = +2

Query: 56  ISSHHRSSFCRRTKKKDSHPLTAEGKAYSSS*EDLHNQPPVLTVCAGIHAKCQGRCSSAY 235
           +S H     C  TKK   H    EG  Y      +     +    AG+H  C+ RC   Y
Sbjct: 31  VSDHSTVELCHWTKKSFKH----EGSCYKHKFYGISTHRCMEFSPAGMH--CENRC--VY 82

Query: 236 *HRPACIASIVPLNSVEIYEESPTRTPGTSVTASKLLPLYRARGYYGPTPTDWEDQEYDL 415
             RP      + +   ++ E     T        KL+      GYYG +  D +  +  L
Sbjct: 83  CWRPMEFYDSLEMKPEQVAEPEEILTK-LMAERKKLI-----NGYYGDSRNDKQRLDESL 136

Query: 416 VAPHEASDSSYLPTAFAEPP 475
           +  H A   S  PT + + P
Sbjct: 137 LPSHYAISLSGEPTMYPKLP 156


>UniRef50_Q4RMS9 Cluster: Chromosome 3 SCAF15018, whole genome shotgun
            sequence; n=8; Eumetazoa|Rep: Chromosome 3 SCAF15018,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 2539

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 168  NHPSSQYAPAYMPSAKGAVAVPTNIALPA*PASYP--*TLSRYMKSLRHERPE 320
            +HPSS  + +   S  G+V VP  +  PA PA++P   +L   +  L   RP+
Sbjct: 1891 SHPSSSRSSSRENSGSGSVGVPIAVPTPAPPAAFPGKSSLGPELARLSQRRPQ 1943


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,405,299
Number of Sequences: 1657284
Number of extensions: 13128849
Number of successful extensions: 36218
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36198
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)