BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0454
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p pro... 30 3.4
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P... 30 3.4
>AY058279-1|AAL13508.1| 1148|Drosophila melanogaster GH03118p
protein.
Length = 1148
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 216 PWHLACMPAHTVR-TGGWLCKSSYDDEYALPSAV 118
PWH++C+ ++ V GGW +D LP+ +
Sbjct: 746 PWHISCVESNKVTPVGGWGTLVDHDGRLILPARI 779
>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
isoform D protein.
Length = 2964
Score = 29.9 bits (64), Expect = 3.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 216 PWHLACMPAHTVR-TGGWLCKSSYDDEYALPSAV 118
PWH++C+ ++ V GGW +D LP+ +
Sbjct: 2562 PWHISCVESNKVTPVGGWGTLVDHDGRLILPARI 2595
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,504,310
Number of Sequences: 53049
Number of extensions: 624734
Number of successful extensions: 2035
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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