Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0452
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.6  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 77  PPSIEYFSDLV*PKATFSEIP 15
           PP +E+F D+V  K +   +P
Sbjct: 295 PPGVEHFEDVVHKKCSNFTLP 315


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 363 CICGYIIESYYF 328
           CICGYI  +  F
Sbjct: 48  CICGYIFSAILF 59


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 308 IVELIIRFSCYITNVMYFC 252
           +   I  F C I ++ YFC
Sbjct: 368 VAGFISDFDCDINSIQYFC 386


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 369 CMYWTDLNYN 398
           C+ W DL+YN
Sbjct: 395 CLSWLDLSYN 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,871
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)