Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0452
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061428-1|AAL28976.1|  971|Drosophila melanogaster LD35896p pro...    29   6.3  
AE014297-2451|AAF55502.1|  971|Drosophila melanogaster CG7212-PA...    29   6.3  

>AY061428-1|AAL28976.1|  971|Drosophila melanogaster LD35896p
           protein.
          Length = 971

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 149 NILISKCFDELELKCLF*NSTTSARQINVMYFVNYKNTLR*LYNT 283
           +I++S CF+EL+  C   +S T A +I  ++ +N  +TL    NT
Sbjct: 627 DIIVSPCFEELQAICQA-DSKTPAARIRTIFRLNMISTLFSSLNT 670


>AE014297-2451|AAF55502.1|  971|Drosophila melanogaster CG7212-PA
           protein.
          Length = 971

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 149 NILISKCFDELELKCLF*NSTTSARQINVMYFVNYKNTLR*LYNT 283
           +I++S CF+EL+  C   +S T A +I  ++ +N  +TL    NT
Sbjct: 627 DIIVSPCFEELQAICQA-DSKTPAARIRTIFRLNMISTLFSSLNT 670


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,429,171
Number of Sequences: 53049
Number of extensions: 435475
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)