BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0451 (701 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 285 6e-78 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 284 7e-78 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 284 7e-78 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 159 5e-40 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 151 7e-38 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 93 3e-20 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 47 3e-06 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 44 2e-05 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 44 2e-05 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 39 8e-04 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 38 0.001 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 35 0.013 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 34 0.023 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 32 0.069 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.49 SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 28 1.5 SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 28 1.5 SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 27 2.0 SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 27 2.0 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.6 SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizos... 27 3.4 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.5 SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 6.0 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 285 bits (698), Expect = 6e-78 Identities = 134/150 (89%), Positives = 140/150 (93%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GT Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508 GEFEAGISK+GQTREHALLA+TLGVKQLIV Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIV 150 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 284 bits (697), Expect = 7e-78 Identities = 133/150 (88%), Positives = 140/150 (93%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508 GEFEAGISK+GQTREHALLA+TLGVKQLIV Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIV 150 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 284 bits (697), Expect = 7e-78 Identities = 133/150 (88%), Positives = 140/150 (93%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GT Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508 GEFEAGISK+GQTREHALLA+TLGVKQLIV Sbjct: 121 GEFEAGISKDGQTREHALLAYTLGVKQLIV 150 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 159 bits (385), Expect = 5e-40 Identities = 72/146 (49%), Positives = 100/146 (68%) Frame = +2 Query: 71 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 250 K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295 Query: 251 AGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 430 G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFE Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFE 355 Query: 431 AGISKNGQTREHALLAFTLGVKQLIV 508 AG + GQTREHA+LA T G+ L+V Sbjct: 356 AGFERGGQTREHAVLARTQGINHLVV 381 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 151 bits (367), Expect = 7e-38 Identities = 72/150 (48%), Positives = 97/150 (64%) Frame = +2 Query: 71 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 250 K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234 Query: 251 AGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 430 + G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFE 294 Query: 431 AGISKNGQTREHALLAFTLGVKQLIVE*TK 520 G +NGQTREHA L LG+ +++V K Sbjct: 295 RGFLENGQTREHAYLLRALGISEIVVSVNK 324 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 93.1 bits (221), Expect = 3e-20 Identities = 58/148 (39%), Positives = 82/148 (55%) Frame = +2 Query: 65 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244 ++K H+NI IGHVD GK+T T I KC ++G+ SF +DK Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93 Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424 + GITI A ++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQ 153 Query: 425 FEAGISKNGQTREHALLAFTLGVKQLIV 508 QTREH LLA +GVKQ++V Sbjct: 154 MP-------QTREHLLLARQVGVKQIVV 174 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 46.8 bits (106), Expect = 3e-06 Identities = 34/113 (30%), Positives = 49/113 (43%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 N+ +I H+D+GK+T T ++Y G F + G V+D L A Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 GITI+ A F + +ID PGH DF + + D AV I+ G Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 44.0 bits (99), Expect = 2e-05 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 229 MGK N+ VI HVD GKST T L+ K G I K +F + A E +G + Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72 Query: 230 WVLDKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406 + L A ++ D+ + + + V +ID+PGH DF + D A+++V Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 44.0 bits (99), Expect = 2e-05 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 229 MGK N+ VI HVD GKST T L+ K G I K +F + A E +G + Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72 Query: 230 WVLDKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406 + L A ++ D+ + + + V +ID+PGH DF + D A+++V Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 38.7 bits (86), Expect = 8e-04 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 19/147 (12%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110 Query: 263 VGITIDIAL----WK---------------FETSKYYVTIIDAPGHRDFIKNMITGTSQA 385 GITI A W+ FE S Y + IID PGH DF + Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTIEVERALRVL 169 Query: 386 DCAVLIVAAGTGEFEAGISKNGQTREH 466 D AVL++ A +G I+ + Q R + Sbjct: 170 DGAVLVLCAVSGVQSQTITVDRQMRRY 196 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 38.3 bits (85), Expect = 0.001 Identities = 26/113 (23%), Positives = 49/113 (43%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 N VI H+D GKST + ++ G I++ + E+ + + G++ Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNFRNQFLDKLEVER------------RRGIT 107 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 V ++ + Y + +ID PGH DF ++ + + +L+V A G Sbjct: 108 VKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 34.7 bits (76), Expect = 0.013 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKA 253 N ++ HVD GK+T L+ G I + T+ + E+ +G + + Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFK 80 Query: 254 GVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 +S K Y + +ID+PGH DF + + + D A ++V A G Sbjct: 81 VISQNDE------KRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 33.9 bits (74), Expect = 0.023 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +2 Query: 266 GITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 GIT I + F+ ++T +D PGH F G + AD VL+VA G Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 32.3 bits (70), Expect = 0.069 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +2 Query: 314 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 493 +V+ +D PGH + M+ G + D A+L++A QT EH + + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 494 KQLIV 508 K +I+ Sbjct: 163 KHIII 167 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.49 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces pombe|chr 3|||Manual Length = 384 Score = 27.9 bits (59), Expect = 1.5 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -3 Query: 285 AISIVIPTLTPAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 154 ++S + LTPA ++YL+ PL S S S + +R SIP Sbjct: 321 SVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364 >SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 27.9 bits (59), Expect = 1.5 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -3 Query: 300 SNFQRAISIVIPTLTPAFSLSNTQAYLKDPLPISWASFSNFSMV 169 S F IS+ +PT + FSL+ ++ K LPI W S + S V Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446 >SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 339 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 257 VSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 412 ++VG D ++K + + + + PGH D I+++ S LI A Sbjct: 186 IAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATA 237 >SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 255 Score = 27.5 bits (58), Expect = 2.0 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -2 Query: 610 AQWLYQLLMYEDTSSDSSNLAHCMVVQWNPF 518 A W Q Y T + +LA + V+W PF Sbjct: 154 ANWPQQWASYHATKAAVKHLARALAVEWAPF 184 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 27.1 bits (57), Expect = 2.6 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 260 SVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406 S +T+ ++ K +T + ID PGH DF+ + + +D VL+V Sbjct: 194 STPLTLAVSDMKGKTFAFQC--IDTPGHVDFVDEVAAPMAISDGVVLVV 240 >SPAC1952.07 |rad1||checkpoint clamp complex protein Rad1|Schizosaccharomyces pombe|chr 1|||Manual Length = 323 Score = 26.6 bits (56), Expect = 3.4 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = -2 Query: 688 LLLRHCTLTKHLVKLNSVPCIKMARNAQWLYQLLMYEDTSSDSSNLAH 545 LL C + +L S C K+ + WLY L+ D + + + H Sbjct: 139 LLTMECEDDVDINRLASTLCTKIIMKSNWLYDALVELDNNMGENLIIH 186 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 26.2 bits (55), Expect = 4.5 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Frame = +2 Query: 269 ITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 361 + I+I + E +++ T+ID PG DFI N Sbjct: 71 VEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pombe|chr 2|||Manual Length = 662 Score = 25.8 bits (54), Expect = 6.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 245 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWWWT 117 V +PK I I++ F P S S C+Y S+D W T Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,846,779 Number of Sequences: 5004 Number of extensions: 58239 Number of successful extensions: 214 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 213 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 325165428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -