Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0451
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 295 2e-80
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 295 2e-80
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 293 8e-80
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 235 3e-62
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 179 2e-45
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 164 6e-41
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 78 7e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 78 7e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 78 7e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 77 1e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 77 1e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 41 7e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 44 8e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 42 3e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 38 0.007
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.021
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.20
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 31 1.1
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 28 5.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.4
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 295 bits (724), Expect = 2e-80
Identities = 140/150 (93%), Positives = 143/150 (95%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKA GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508
GEFEAGISKNGQTREHALLA TLGVKQLIV
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIV 150
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 514 NKMDSTEPPYSE 549
NKMDSTEPP+SE
Sbjct: 153 NKMDSTEPPFSE 164
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 295 bits (724), Expect = 2e-80
Identities = 140/150 (93%), Positives = 143/150 (95%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKA GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508
GEFEAGISKNGQTREHALLA TLGVKQLIV
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIV 150
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 514 NKMDSTEPPYSE 549
NKMDSTEPP+SE
Sbjct: 153 NKMDSTEPPFSE 164
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 293 bits (719), Expect = 8e-80
Identities = 138/149 (92%), Positives = 142/149 (95%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKA GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLI 505
GEFEAGISKNGQTREHALLA TLGVKQL+
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 235 bits (574), Expect = 3e-62
Identities = 109/117 (93%), Positives = 112/117 (95%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 409
DKLKA GITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 514 NKMDSTEPPYSE 549
NKMDSTEPP+SE
Sbjct: 119 NKMDSTEPPFSE 130
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 179 bits (436), Expect = 2e-45
Identities = 84/147 (57%), Positives = 106/147 (72%)
Frame = +2
Query: 68 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 247
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 248 KAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 427
+ G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 428 EAGISKNGQTREHALLAFTLGVKQLIV 508
E G GQT+EHALL +LGV QLIV
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIV 313
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 179 bits (436), Expect = 2e-45
Identities = 84/147 (57%), Positives = 106/147 (72%)
Frame = +2
Query: 68 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 247
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 248 KAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 427
+ G+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 428 EAGISKNGQTREHALLAFTLGVKQLIV 508
E G GQT+EHALL +LGV QLIV
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIV 331
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 164 bits (398), Expect = 6e-41
Identities = 73/149 (48%), Positives = 103/149 (69%)
Frame = +2
Query: 62 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 241
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 242 KLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 422 EFEAGISKNGQTREHALLAFTLGVKQLIV 508
EFE G + GQTREH++L T GVK L++
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVI 252
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (334), Expect = 4e-33
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLK 250
DKLK
Sbjct: 61 DKLK 64
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 77.8 bits (183), Expect = 7e-15
Identities = 52/143 (36%), Positives = 72/143 (50%)
Frame = +2
Query: 65 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424
+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 425 FEAGISKNGQTREHALLAFTLGV 493
QTREH LLA +GV
Sbjct: 150 MP-------QTREHLLLARQVGV 165
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 77.8 bits (183), Expect = 7e-15
Identities = 52/143 (36%), Positives = 72/143 (50%)
Frame = +2
Query: 65 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424
+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 425 FEAGISKNGQTREHALLAFTLGV 493
QTREH LLA +GV
Sbjct: 151 MP-------QTREHLLLARQVGV 166
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 77.8 bits (183), Expect = 7e-15
Identities = 52/143 (36%), Positives = 72/143 (50%)
Frame = +2
Query: 65 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424
+ GITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 425 FEAGISKNGQTREHALLAFTLGV 493
QTREH LLA +GV
Sbjct: 151 MP-------QTREHLLLARQVGV 166
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 77.0 bits (181), Expect = 1e-14
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Frame = +2
Query: 71 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424
K GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 425 FEAGISKNGQTREHALLAFTLGVKQLIV 508
E QT+EH +LA +GVK + +
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAI 166
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 77.0 bits (181), Expect = 1e-14
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Frame = +2
Query: 71 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424
K GITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 425 FEAGISKNGQTREHALLAFTLGVKQLIV 508
E QT+EH +LA +GVK + +
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAI 166
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 45.2 bits (102), Expect = 5e-05
Identities = 33/113 (29%), Positives = 48/113 (42%)
Frame = +2
Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262
N ++ HVD GKST L+ CG + +K+ +LDKL+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
GIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 44.8 bits (101), Expect = 6e-05
Identities = 35/113 (30%), Positives = 49/113 (43%)
Frame = +2
Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262
NI VI HVD+GK+T T L+Y G I A + KG+ V D L
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
GIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.7 bits (91), Expect(2) = 7e-05
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 206 GKGSFKYAWVLDKLKAGVSVGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 382
GK + A ++ AG GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 383 ADCAVLIVAAGTG 421
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.0 bits (47), Expect(2) = 7e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 86 IVVIGHVDSGKST 124
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/113 (30%), Positives = 48/113 (42%)
Frame = +2
Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262
NI + H+DSGK+T T ++Y G ID + +G +D +
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
GITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 211
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 212 GSFKYAWVLDK----LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 379
+ + L+K G + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 380 QADCAVLIVAAGTG 421
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 211
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 212 GSFKYAWVLDK----LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 379
+ + L+K G + T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 380 QADCAVLIVAAGTG 421
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 37.9 bits (84), Expect = 0.007
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 11/169 (6%)
Frame = +2
Query: 35 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 205
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 206 GKGSFKYAWVLDKLKAGVSV------GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 367
G+ S +L G V +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTI 244
Query: 368 TGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508
G + D +L++ A G G T+EH LA +L V +V
Sbjct: 245 FGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV 286
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 36.3 bits (80), Expect = 0.021
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 80 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGV 259
+N+ ++GHVDSGK+T T + E+G S A G+
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 260 SVGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 436
T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 437 ISKNGQTREHALLAFTLGVKQLIV 508
I QT EH LLA ++I+
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVII 130
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.11
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 12/170 (7%)
Frame = +2
Query: 35 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEM 205
++IRD P K+ + V+G+VD+GKST G L + G RT K E
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFES 185
Query: 206 GKGSFKYAWVLDKLKAGVSV------GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMI 367
G+ S +L G V +D + +K VT ID GH ++K I
Sbjct: 186 GRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTI 244
Query: 368 TGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508
G + + +L++ A G G T+EH LA +L V +V
Sbjct: 245 FGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV 287
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +2
Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/113 (24%), Positives = 46/113 (40%)
Frame = +2
Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 32.7 bits (71), Expect = 0.26
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Frame = +2
Query: 32 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC----GGIDKRTIEKFEKEAQ 199
+ ++R P+ ++ + + V+G D GKST G L C G + I +F E +
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIFRFPHEVR 212
Query: 200 EMGKGSFKYAWVLDKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 379
GK S V+ G V + E S VT+ID G + K I G +
Sbjct: 213 -TGKTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLT 271
Query: 380 --QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508
A L+VAA + GI+ TREH L L + ++
Sbjct: 272 GYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL 309
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.3 bits (70), Expect = 0.35
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 65 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 241
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 242 KLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406
+ + GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.3 bits (70), Expect = 0.35
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 65 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 241
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 242 KLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406
+ + GIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = -2
Query: 502 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 344
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 343 VSRSINDGNIVLASFELPESNIDCDTXAHASL*FVQYPSI 224
S S +D E+P ++ C++ ++L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 314 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 409
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.9 bits (64), Expect = 1.8
Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Frame = +2
Query: 80 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGV 259
+N+ ++GHVDSGK+T T + E+G S A G+
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 260 SVGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 436
T+D+ + S + +ID PGH I+ ++ ++ D A+ +++ + G
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKG 112
Query: 437 ISKNGQTREHALLAFTL 487
+ G ++ +L
Sbjct: 113 LKSMGVDENSPIVEMSL 129
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -2
Query: 694 PXLLLRHCTLTKHLVKLNSVPCIKMARNAQWLYQLLMYEDTSSDSSNLAHCMV 536
P + H K + N PC+ + Y+ L Y+D + NL+ +V
Sbjct: 70 PEVATLHDVFVKGKTESNGGPCVGTRSSGDADYEFLTYDDVHEQAKNLSMTLV 122
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 317 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 412
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,026,858
Number of Sequences: 27780
Number of extensions: 335173
Number of successful extensions: 997
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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