Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0451
(701 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 302 2e-84
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 298 3e-83
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 184 1e-48
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 162 3e-42
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 26 0.40
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 3.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 302 bits (741), Expect = 2e-84
Identities = 145/150 (96%), Positives = 145/150 (96%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKA GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508
GEFEAGISKNGQTREHALLAFTLGVKQLIV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIV 150
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 511 VNKMDSTEPPYSEPDLRNQKK--YPHTSEVG--TTTVRFVP 621
VNKMDSTEPPYSE KK + ++G V FVP
Sbjct: 152 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 192
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 298 bits (732), Expect = 3e-83
Identities = 143/150 (95%), Positives = 144/150 (96%)
Frame = +2
Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418
DKLKA GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLIV 508
GEFEAGISKNGQTREHALLAFTLGVKQLIV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIV 150
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +1
Query: 511 VNKMDSTEPPYSEPDLRNQKK--YPHTSEVG--TTTVRFVP 621
VNKMD T+PPYSE KK + ++G T +V FVP
Sbjct: 152 VNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVP 192
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 184 bits (447), Expect = 1e-48
Identities = 89/93 (95%), Positives = 89/93 (95%)
Frame = +2
Query: 230 WVLDKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 409
WVLDKLKA GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 410 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIV
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 93
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 511 VNKMDSTEPPYSEPDLRNQKK--YPHTSEVG--TTTVRFVP 621
VNKMDSTEPPYSE KK + ++G V FVP
Sbjct: 95 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 135
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 162 bits (393), Expect = 3e-42
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +2
Query: 278 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 457
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 458 REHALLAFTLGVKQLIV 508
REHALLAFTLGVKQLIV
Sbjct: 61 REHALLAFTLGVKQLIV 77
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 511 VNKMDSTEPPYSEPDLRNQKK--YPHTSEVG--TTTVRFVP 621
VNKMDSTEPPYSE KK + ++G V FVP
Sbjct: 79 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 119
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 317 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.53
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 71 KTHINIVVIGHVDSGKST 124
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.8 bits (54), Expect = 0.40
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 535 PPYSEPDLRNQKKYPHTSEVGT 600
PPY+ D+RN Y H + G+
Sbjct: 81 PPYNRMDMRNATYYQHQQDHGS 102
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 80 INIVVIGHVDSGKST 124
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 72 FSLPIFG*SRITNCV*YPSL 13
FSLPIFG I +C+ Y L
Sbjct: 57 FSLPIFGTRWIFSCIGYYKL 76
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 302 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 403
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 302 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 403
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 3.7
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = -3
Query: 363 MFLMKSLCPGASMMVT*YLLVSNFQRAISIVIPTLTPAFSLSNTQAYLKDPLPISWASFS 184
M+L ++L + +LL+ F +V+ P+ + +N K P P ++
Sbjct: 589 MWLRRALASLMVFSLGLFLLLDMFN---CVVVEETIPSLNSTNVTLSTKCPYPSYYSYIG 645
Query: 183 NFSMVRLSIPPHL 145
++V S+P ++
Sbjct: 646 VLTLVATSMPTYI 658
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,610
Number of Sequences: 438
Number of extensions: 3941
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -