BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0451 (701 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 268 2e-72 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 268 2e-72 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 268 2e-72 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 268 2e-72 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 152 2e-37 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 150 8e-37 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 86 2e-17 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 79 3e-15 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 48 8e-06 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 48 8e-06 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 46 2e-05 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 44 7e-05 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 41 7e-04 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 40 0.001 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 40 0.001 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 38 0.006 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 38 0.006 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 34 0.079 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 34 0.10 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 34 0.10 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 33 0.24 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.3 At1g01590.1 68414.m00076 ferric-chelate reductase, putative simi... 29 3.0 At2g47970.1 68415.m06002 NPL4 family protein contains Pfam domai... 29 3.9 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 3.9 At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 5.2 At3g63000.1 68416.m07077 NPL4 family protein contains Pfam domai... 28 6.9 At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR... 27 9.1 At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger) fa... 27 9.1 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 268 bits (657), Expect = 2e-72 Identities = 128/149 (85%), Positives = 135/149 (90%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLI 505 G FEAGISK+GQTREHALLAFTLGVKQ+I Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 268 bits (657), Expect = 2e-72 Identities = 128/149 (85%), Positives = 135/149 (90%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLI 505 G FEAGISK+GQTREHALLAFTLGVKQ+I Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 268 bits (657), Expect = 2e-72 Identities = 128/149 (85%), Positives = 135/149 (90%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLI 505 G FEAGISK+GQTREHALLAFTLGVKQ+I Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 268 bits (657), Expect = 2e-72 Identities = 128/149 (85%), Positives = 135/149 (90%) Frame = +2 Query: 59 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 238 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 239 DKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 418 DKLKA GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 419 GEFEAGISKNGQTREHALLAFTLGVKQLI 505 G FEAGISK+GQTREHALLAFTLGVKQ+I Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 152 bits (369), Expect = 2e-37 Identities = 68/146 (46%), Positives = 101/146 (69%), Gaps = 1/146 (0%) Frame = +2 Query: 74 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 253 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 254 GVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 433 GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357 Query: 434 GISK-NGQTREHALLAFTLGVKQLIV 508 G GQTREHA + GV+Q+IV Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIV 383 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 150 bits (364), Expect = 8e-37 Identities = 69/147 (46%), Positives = 100/147 (68%) Frame = +2 Query: 68 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 247 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 248 KAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 427 + G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217 Query: 428 EAGISKNGQTREHALLAFTLGVKQLIV 508 E G + GQTREH LA TLGV +LIV Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIV 244 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 86.2 bits (204), Expect = 2e-17 Identities = 52/151 (34%), Positives = 77/151 (50%) Frame = +2 Query: 56 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 235 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116 Query: 236 LDKLKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 415 +D + GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176 Query: 416 TGEFEAGISKNGQTREHALLAFTLGVKQLIV 508 G QT+EH LLA +GV ++V Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVV 200 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 79.0 bits (186), Expect = 3e-15 Identities = 52/147 (35%), Positives = 72/147 (48%) Frame = +2 Query: 65 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 244 + K H+N+ IGHVD GK+T T + K E GK +DK Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107 Query: 245 LKAGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 424 GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167 Query: 425 FEAGISKNGQTREHALLAFTLGVKQLI 505 QT+EH LLA +GV L+ Sbjct: 168 MP-------QTKEHILLARQVGVPSLV 187 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 47.6 bits (108), Expect = 8e-06 Identities = 37/128 (28%), Positives = 60/128 (46%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 NI + H+DSGK+T T +++ G I E E ++ G G+ + L++ K G++ Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGAKMDSMDLEREK-GIT 120 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 442 + WK Y V IID PGH DF + D A+L++ + G I+ Sbjct: 121 IQSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 443 KNGQTREH 466 + Q R + Sbjct: 177 VDRQMRRY 184 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 47.6 bits (108), Expect = 8e-06 Identities = 37/128 (28%), Positives = 60/128 (46%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 NI + H+DSGK+T T +++ G I E E ++ G G+ + L++ K G++ Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGAKMDSMDLEREK-GIT 120 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 442 + WK Y V IID PGH DF + D A+L++ + G I+ Sbjct: 121 IQSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 443 KNGQTREH 466 + Q R + Sbjct: 177 VDRQMRRY 184 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 46.4 bits (105), Expect = 2e-05 Identities = 29/117 (24%), Positives = 53/117 (45%) Frame = +2 Query: 71 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 250 K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W+ + + Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDWMEQEQE 144 Query: 251 AGVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 G+++ W K+ + IID PGH DF + D A+ + + G Sbjct: 145 RGITITSAATTTFW----DKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 44.4 bits (100), Expect = 7e-05 Identities = 34/113 (30%), Positives = 50/113 (44%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 NI ++ HVD GK+T HLI GG + GK F +D L Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 IT+ + + Y + +ID+PGH DF + T +D A+++V A G Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 41.1 bits (92), Expect = 7e-04 Identities = 25/113 (22%), Positives = 52/113 (46%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAGVS 262 N +I H+D GKST L+ G + R +++ + ++ + + G++ Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLER------------ERGIT 135 Query: 263 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 + + + +E + + + +ID PGH DF + + + A+L+V A G Sbjct: 136 IKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 40.3 bits (90), Expect = 0.001 Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 7/132 (5%) Frame = +2 Query: 47 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 226 D K EK N +I H+D GKST L+ G I K G G +Y Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102 Query: 227 AWVLDKLKAGVSVGITIDIALWKFET-------SKYYVTIIDAPGHRDFIKNMITGTSQA 385 LDKL+ + + A +E S Y + +ID PGH DF + S Sbjct: 103 ---LDKLQRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSAC 159 Query: 386 DCAVLIVAAGTG 421 A+L+V A G Sbjct: 160 QGALLVVDAAQG 171 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 40.3 bits (90), Expect = 0.001 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYAWVLDKLKA 253 N+ VI HVD GKST T L+ G I + + + A E +G + Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERG-------ITIKST 73 Query: 254 GVSVGITI-DIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 406 G+S+ + D +L F + ++Y + +ID+PGH DF + D A+++V Sbjct: 74 GISLYYEMTDESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 37.9 bits (84), Expect = 0.006 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV-LDKLKAGV 259 N+ ++GH+ GK+ L+ + + K EK KY +D+ + + Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYTDTRVDEQERNI 190 Query: 260 SV-GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 S+ + + + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 191 SIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 37.9 bits (84), Expect = 0.006 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%) Frame = +2 Query: 83 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV-LDKLKAGV 259 N+ ++GH+ GK+ L+ + + K EK KY +D+ + + Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYTDTRVDEQERNI 190 Query: 260 SV-GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 S+ + + + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 191 SIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 34.3 bits (75), Expect = 0.079 Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Frame = +2 Query: 53 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFKY 226 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 25 PEVISRQATINIGTIGHVAHGKST----VVKAISGVQTVRFKNELERNITIKLGYANAKI 80 Query: 227 AWVLDK-------LKA-GVSVGITIDIALWKFETSKY----YVTIIDAPGHRDFIKNMIT 370 D+ KA G T + + FE SK +V+ +D PGH + M+ Sbjct: 81 YKCEDEKCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLN 140 Query: 371 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508 G + D A+L++AA QT EH + +K +I+ Sbjct: 141 GAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHIII 180 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 33.9 bits (74), Expect = 0.10 Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Frame = +2 Query: 53 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 223 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 224 YAWVLDKLK---------AGVSVGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 370 Y DK +G T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 371 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508 G + D A+L++AA QT EH + +K +I+ Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIII 186 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 33.9 bits (74), Expect = 0.10 Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 14/166 (8%) Frame = +2 Query: 53 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 223 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 224 YAWVLDKLK---------AGVSVGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 370 Y DK +G T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 371 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 508 G + D A+L++AA QT EH + +K +I+ Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIII 186 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 32.7 bits (71), Expect = 0.24 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 317 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 421 +T +D PGH F + G + D VL+VAA G Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 32.7 bits (71), Expect = 0.24 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = +2 Query: 314 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 493 +V+ +D PGH + M+ G + D A+LI+AA QT EH + + Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173 Query: 494 KQLIV 508 K +I+ Sbjct: 174 KDIII 178 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 29.9 bits (64), Expect = 1.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406 +ID PGH F G+S D A+L+V Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 29.9 bits (64), Expect = 1.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406 +ID PGH F G+S D A+L+V Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 29.9 bits (64), Expect = 1.7 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 323 IIDAPGHRDFIKNMITGTSQADCAVLIV 406 +ID PGH F G+S D A+L+V Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 29.5 bits (63), Expect = 2.3 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 317 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 406 + +ID PGH F G++ D A+L+V Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587 >At1g01590.1 68414.m00076 ferric-chelate reductase, putative similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile: PF01794 ferric reductase like transmembrane component Length = 704 Score = 29.1 bits (62), Expect = 3.0 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = -2 Query: 655 LVKLNSVPCIKMARNAQWLYQLLMYEDTSSDSSNLAHCMVVQWNPFCLLYDELFDTE 485 LV +PC + N +LMY TS+ N+ +QW+PF ++ + E Sbjct: 330 LVSARVLPCDTVELNFS-KNPMLMYSPTSTMFVNIPSISKLQWHPFTIISSSKLEPE 385 >At2g47970.1 68415.m06002 NPL4 family protein contains Pfam domain, PF05021: NPL4 family Length = 413 Score = 28.7 bits (61), Expect = 3.9 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 667 LTKHLVKLNSVPCIKMARNAQWLYQLLMYEDTSSDSSNLAHCMVVQ 530 L HL + S+P +K + L + + D SSD LA C+ +Q Sbjct: 350 LKTHLDRAKSLPLVKKMSDFHLLLFVAQFLDVSSDVPALAECVRLQ 395 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 28.7 bits (61), Expect = 3.9 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 4/64 (6%) Frame = +2 Query: 242 KLKAGVSVGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 409 K+ A + GIT I +K +D PGH F G D A+++VA Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584 Query: 410 AGTG 421 A G Sbjct: 585 ADDG 588 >At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha subunit, chloroplast / 60 kDa chaperonin alpha subunit / CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit, CPN-60 alpha) [Arabidopsis thaliana] Length = 586 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/52 (28%), Positives = 26/52 (50%) Frame = -2 Query: 409 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXAHA 254 ++D+HS +L+ D + D + ++ N+VL F P+ D T A A Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARA 103 >At3g63000.1 68416.m07077 NPL4 family protein contains Pfam domain, PF05021: NPL4 family Length = 413 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -2 Query: 667 LTKHLVKLNSVPCIKMARNAQWLYQLLMYEDTSSDSSNLAHCMVVQ 530 L H+ + S+P +K + L + + D SSD LA C+ +Q Sbjct: 350 LKTHMERARSLPFVKRISDFHLLLFVAQFLDVSSDVPALAECVRLQ 395 >At5g45240.1 68418.m05552 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 812 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +2 Query: 524 IPLNHHTVSQI*GIRRSILIHQKLVQPLCVSCHFDARDTVELHQMLCQ 667 + L +H I +R S +H VQ + HF R V LH + CQ Sbjct: 415 LDLPNHVAESISDLR-SPCVHHPSVQVQSLPKHFHRRQLVLLHGLACQ 461 >At3g53410.1 68416.m05894 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain: PF00097: Zinc finger, C3HC4 type (RING finger) Length = 299 Score = 27.5 bits (58), Expect = 9.1 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 505 RRVNKMDSTEPPYSEPDLRNQKKYP 579 R N D T PPY P+ + Q YP Sbjct: 10 RPENHRDRTSPPYPNPNAQYQGNYP 34 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,168,735 Number of Sequences: 28952 Number of extensions: 314764 Number of successful extensions: 945 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 936 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1506636208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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