Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0450
         (670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0091 + 19967390-19969825                                         29   2.5  
05_04_0204 - 19022329-19023990                                         29   3.3  

>11_06_0091 + 19967390-19969825
          Length = 811

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 311 SIWSSLVWTKVSPRGSMPHLYISMNCLTTSTFMYLSQLFSML 186
           +++S  +   ++  G + HL ++ NCL+ +   YLS L SM+
Sbjct: 539 NMFSGNIPVSITKLGRLSHLDLACNCLSGTIPQYLSNLTSMM 580


>05_04_0204 - 19022329-19023990
          Length = 553

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 190 IEKSCDKYMNVDVVKQFMEMYKWGMLPRGETF 285
           + K CD++  + VVK F +M K G+ P   TF
Sbjct: 355 MRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTF 386


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,150,746
Number of Sequences: 37544
Number of extensions: 301791
Number of successful extensions: 727
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)