Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0450
         (670 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_58958| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.35)             29   4.5  
SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35)                  28   6.0  
SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035)                28   7.9  
SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  
SB_40678| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)            28   7.9  

>SB_58958| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.35)
          Length = 1076

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 121 KLLDHILQXTMXEDIKEIAKEYNIEKSCDKYMNVDVVKQFMEMY 252
           ++L+H +Q  + E IK +     I K C  YM+   V Q +  Y
Sbjct: 327 RVLEHFMQAFVPEIIKRLKDLAQIAKDCFTYMDRGFVFQMISYY 370


>SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35)
          Length = 254

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -2

Query: 360 IEVLSVVEDSEDFDGFFHLELVGVDEGLSTREHAPFIHLHELLNDIDI 217
           +E + ++ED +  DG   L+ + V +G++  +   F+    LL+D+D+
Sbjct: 12  VEDVGLLEDVDVVDGVTLLDDIDVVDGVTLLDDVDFVDGVTLLDDVDV 59


>SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035)
          Length = 873

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/50 (24%), Positives = 31/50 (62%)
 Frame = -2

Query: 366 ENIEVLSVVEDSEDFDGFFHLELVGVDEGLSTREHAPFIHLHELLNDIDI 217
           ++++ +++++D +  DG   L+ VGV +G++  +    +    LL+D+D+
Sbjct: 114 DDVDGVTLLDDVDVVDGDPLLDDVGVVDGVTLLDDVDVVDSDTLLDDVDV 163


>SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 240

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
 Frame = +1

Query: 163 IKEIAKEYNIEKSCDKYMNVDVVKQFME---MYKWGMLPRGETFVHTNELQMEEAVKVFR 333
           +K ++ +YN +K+ +     ++   F +   +  +  LP+     H +    EEA+    
Sbjct: 144 LKTLSVKYNNDKTRESVTEEELTSMFEDCGDVADFRFLPKDRKMAHLSMATTEEAIDALI 203

Query: 334 VLYYAKDFDVFMRTACWMRXRIN 402
           V     D D+  R   W    +N
Sbjct: 204 VSLSTVDADLCFRGFSWCDLPVN 226


>SB_40678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 236

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +1

Query: 157 EDIKEIAKEYNIEKSCDKYMNVDVVKQFMEMYKWGMLPRGETFVHTNELQMEEAVKV 327
           ++I  I K++   K  +K MN++ +   MEMY   ML    TF+ + +       K+
Sbjct: 73  QEIGAIVKKHT-HKGEEKQMNINAIPNNMEMYMAFMLGNHLTFIDSFQFMSSSLEKL 128


>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
          Length = 1235

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 302  SSLVWTKVSPRGSMPHLYISMNCLTTSTFMYLSQLFSMLYS 180
            +S  W + +PRG + H   S+ C T  +F   S   + + S
Sbjct: 1180 NSCPWQQATPRGHVTHPSFSLMCSTHKSFQQYSGFLASVVS 1220


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,989,498
Number of Sequences: 59808
Number of extensions: 326496
Number of successful extensions: 1042
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)