Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0449
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_23657| Best HMM Match : Sushi (HMM E-Value=0) 38 0.009
SB_45658| Best HMM Match : Sushi (HMM E-Value=0) 36 0.027
SB_30420| Best HMM Match : Sushi (HMM E-Value=2.2e-13) 36 0.027
SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26) 35 0.047
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 35 0.062
SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34) 33 0.14
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 33 0.14
SB_18744| Best HMM Match : Sushi (HMM E-Value=1.1e-05) 33 0.25
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) 32 0.43
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.76
SB_16326| Best HMM Match : Sushi (HMM E-Value=5.4e-18) 30 1.3
SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16) 30 1.3
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 30 1.3
SB_5456| Best HMM Match : Sushi (HMM E-Value=3.1e-15) 30 1.3
SB_8548| Best HMM Match : Sushi (HMM E-Value=0.00061) 30 1.8
SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_39600| Best HMM Match : Sushi (HMM E-Value=0) 29 3.1
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.1
SB_13205| Best HMM Match : RCSD (HMM E-Value=4.7) 29 3.1
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 29 3.1
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 29 4.1
SB_42484| Best HMM Match : Sulfate_transp (HMM E-Value=0.00024) 28 7.1
SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10) 28 7.1
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 28 7.1
SB_59607| Best HMM Match : UPF0258 (HMM E-Value=6.6) 27 9.4
SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13) 27 9.4
>SB_23066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 65 CVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCL-NGWWSDKLP 241
C P P HGS P DS V+ +C GY + GR+ +FCL +G WSDK+P
Sbjct: 711 CRDPGTPKHGS----RAPTFGIFSFRDS--VDFSCSQGYTLTGRSRIFCLEDGTWSDKMP 764
Query: 242 QCVRSARSTV 271
CV + + V
Sbjct: 765 VCVGTPKCPV 774
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = +2
Query: 47 PSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWW 226
P+ C P P +G + N + GQ +V C G+ + G +++ C+NG W
Sbjct: 471 PTCRADCQDPGVPVNGGR---HGNNFSEGQ-----RVGFFCSSGHVIDGPSEIMCVNGRW 522
Query: 227 SDKLPQC 247
SDK P C
Sbjct: 523 SDKKPTC 529
Score = 34.7 bits (76), Expect = 0.062
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 167 CKPGYGVMGRNDVFCLNGWWSDKLPQCVR 253
CK G+ ++G + + C +G W+D +P C+R
Sbjct: 373 CKAGFRLVGSSVLACNDGTWNDSVPVCIR 401
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 152 QVNVTCKPGYGVMGRNDVFCL-NGWWSDKLPQCVRS 256
+V TC PG+ ++G + C+ NG W+ LP CV S
Sbjct: 615 RVYYTCLPGFRMIGPSKRVCMSNGTWAGYLPHCVAS 650
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 131 GQTF-DSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
G F D +V+ C GY + G V C +G WS +P C
Sbjct: 434 GNNFSDGQRVSFFCNNGYTLFGVGSVSCDDGEWSGDVPTC 473
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 65 CVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQ 244
C P +P HGS + ++ + +Q T + GY + G + C+NG W+ P
Sbjct: 288 CPDPGFPQHGSRIGYSS-----FKNMGVVQFMCT-REGYDLQGPGAIRCINGTWNAATPT 341
Query: 245 C 247
C
Sbjct: 342 C 342
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 167 CKPGYGVMGRNDVFCLNGWWSDKLPQCV-RSAR 262
C+ G+ + GR+ C++G W+ P+C+ SAR
Sbjct: 248 CQDGFTMKGRDSAQCVDGNWTTPKPECLANSAR 280
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = +2
Query: 47 PSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWW 226
P+ GC P P + + + D +V CKPG+ ++G + C+ W
Sbjct: 527 PTCRAGCAQPSTPPNSVLYI----GSRKSYYSDQERVFYLCKPGFFLVGMRERQCMGNNW 582
Query: 227 SDKLPQCV 250
+ +C+
Sbjct: 583 TSVAFKCI 590
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 47 PSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWW 226
P GGC P P +G + + N + TC + + G + + C G W
Sbjct: 160 PQCKGGCSDPGTPENGQRIGNDFSNGG--------SLAFTCDRNFSLDGPSLIKCKAGLW 211
Query: 227 SDKLPQC 247
S + PQC
Sbjct: 212 SSQPPQC 218
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 167 CKPGYGVMGRNDVFCLNGWWSDKLPQC 247
C GY ++G + + C +G W PQC
Sbjct: 136 CDLGYSLIGSDMITCSDGKWIPDPPQC 162
>SB_23657| Best HMM Match : Sushi (HMM E-Value=0)
Length = 331
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 PSASGGCVLPQYPAHGSYVVLNTPNATPGQTF-DSIQVNVTCKPGYGVMGRNDVFCLNGW 223
P+ + GC P P +G G F D + V+ +C+ G ++GR + C G
Sbjct: 155 PTCTSGCTNPGKPRNGY---------RHGNDFSDGMTVSFSCRVGLDLIGRERITCSGGT 205
Query: 224 WSDKLPQCVR 253
W+ + P+C R
Sbjct: 206 WNGRKPKCKR 215
Score = 31.9 bits (69), Expect = 0.43
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 152 QVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
+V+ +C G+ ++G + C NG W + P C
Sbjct: 126 RVSFSCNRGFRLIGETSITCYNGQWRNAPPTC 157
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 143 DSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
D + +C PGY G C +G W+ P C
Sbjct: 295 DGTTIRYSCNPGYTRSGPGRASCDDGTWTPLPPTC 329
>SB_45658| Best HMM Match : Sushi (HMM E-Value=0)
Length = 875
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 PSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDS-IQVNVTCKPGYGVMGRNDVFC-LNG 220
P SG C P P HG + + + F S + TC Y + G + C NG
Sbjct: 20 PDHSGQCRDPGTPTHGQRSI----SPAGQEPFPSGTLIRFTCDSNYQLSGARKIQCESNG 75
Query: 221 WWSDKLPQC 247
WS K+P C
Sbjct: 76 EWSSKMPSC 84
>SB_30420| Best HMM Match : Sushi (HMM E-Value=2.2e-13)
Length = 124
Score = 35.9 bits (79), Expect = 0.027
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCVRSAR 262
V +C GY ++G ++ C NG W + P C+ +R
Sbjct: 84 VTYSCNQGYRLVGTRNITCYNGEWKGRYPLCIGVSR 119
>SB_29317| Best HMM Match : Sushi (HMM E-Value=6.9e-26)
Length = 803
Score = 35.1 bits (77), Expect = 0.047
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCV 250
V +C GY ++G ++ C NG W + P C+
Sbjct: 84 VTYSCNQGYRLVGTRNITCYNGEWKGRYPLCI 115
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 119 NATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCVRSARSTVMLASSTNVC 298
N T G T TC G+ ++G + C+ G W P+C+ S S + + C
Sbjct: 128 NYTTGVTTGGEVAKFTCTSGHDLIGAMQITCVMGKWGGVRPRCLGSITSIRRMKCGKDYC 187
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 56 SGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDK 235
+ GC P+ P +G V ++ G S V VTC G+ + G C +G W+
Sbjct: 1142 ASGCPSPKSPTNGKIV------SSTGSGHGS-SVTVTCNAGFKLTGDGVRTCNHGRWTGN 1194
Query: 236 LPQCV 250
PQCV
Sbjct: 1195 DPQCV 1199
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFC-LNGWWSDKLPQC 247
+++TC PGY ++G + C +G WS P+C
Sbjct: 1348 LSITCNPGYRLVGPSTRTCQADGKWSGSQPRC 1379
>SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34)
Length = 174
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 143 DSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCVRSAR 262
D V+ +C GY + G + + C G W P+C R R
Sbjct: 77 DGKSVSFSCYRGYDLYGNSQLTCRGGSWDGLRPECKRQCR 116
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 152 QVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
+V C PG G+ + C +G WS +P+C
Sbjct: 141 RVTYRCDPGTDPDGQTQLVCNDGRWSSPVPEC 172
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 152 QVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCV 250
+++ C + +G + C +G WSD LP+C+
Sbjct: 24 RIDFYCNSRFRRIGASSSTCNDGRWSDDLPKCI 56
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 33.5 bits (73), Expect = 0.14
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
VN +C+ GY ++G + C +G W+ P+C
Sbjct: 1701 VNFSCQSGYQIVGSSSRSCTSGQWTGTQPRC 1731
>SB_18744| Best HMM Match : Sushi (HMM E-Value=1.1e-05)
Length = 77
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 65 CVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQ 244
C+ P +P HGS + ++ + +Q T + GY + G + C+NG W+ P
Sbjct: 21 CLDPGFPQHGSRIGYSS-----FKNMGVVQFMCT-REGYDLQGPGAIRCINGTWNAATPT 74
Query: 245 C 247
C
Sbjct: 75 C 75
>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2956
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 164 TCKPGYGVMGRNDVFCL-NGWWSDKLPQC 247
+C+PGY + G+ + C NG WS P C
Sbjct: 2221 SCEPGYAMQGQATLHCYNNGSWSASFPTC 2249
>SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18)
Length = 214
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCL-NGWWSDKLPQCVR 253
V TC + + G D+ C +G WS +LP+C+R
Sbjct: 180 VRFTCNSNHAMGGAADLVCQRDGTWSAQLPRCIR 213
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFC-LNGWWSDKLPQCVR 253
V C GY ++G+ + C NG W ++P+CV+
Sbjct: 371 VRFVCVSGYVLIGQEFLKCGCNGQWDSRVPKCVK 404
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 164 TCKPGYGVMGRNDVFCLNG-WWSDKLPQC 247
TCK GY ++G C NG W +P C
Sbjct: 312 TCKRGYKLIGEERRTCKNGRWRPPAVPSC 340
>SB_16326| Best HMM Match : Sushi (HMM E-Value=5.4e-18)
Length = 258
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 143 DSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
D + +C PGY G C +G W+ + P C
Sbjct: 81 DGTTIRYSCNPGYTRSGPGRASCDDGTWTPRPPTC 115
>SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16)
Length = 986
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCL-NGWWSDKLPQCV 250
V C PG+G+ G CL +G WS+ P+CV
Sbjct: 300 VTYNCYPGFGMRGHPSRECLPSGMWSEP-PECV 331
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 26 SGKPTXXPSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDV 205
SGKP + C P P + SY L TP+ + D V +CKPGY ++G
Sbjct: 1115 SGKPIACVPTT--CKRPHIPPN-SY--LTTPDRDSYELED--YVYYSCKPGYLMVGAPVQ 1167
Query: 206 FCLNGWWSDKLPQC 247
C G W++ +C
Sbjct: 1168 ICKYGNWTEANFRC 1181
>SB_5456| Best HMM Match : Sushi (HMM E-Value=3.1e-15)
Length = 149
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFCL-NGWWSDKLPQCV 250
V C PG+G+ G CL +G WS+ P+CV
Sbjct: 26 VTYNCYPGFGMRGHPSRECLPSGMWSEP-PECV 57
>SB_8548| Best HMM Match : Sushi (HMM E-Value=0.00061)
Length = 425
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 137 TFDSIQVNVTCKPGYGVMGRNDVFCLNGWWSDKLPQCVRSARSTVMLASSTNV-CSPMVT 313
T + I C + + G D+ C +G W+ P+CV V + + C +V
Sbjct: 303 TDNGISYKFQCNQAFKLEGNPDISCKDGEWTGHKPKCVNKGPLPVWAVALIGIGCGVLVM 362
Query: 314 XV 319
+
Sbjct: 363 AI 364
>SB_29339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 146 SIQVNVTCKPGYGVMGRNDVFC-LNGWWSDKLPQC 247
S +N+TC GY ++G C NG WS C
Sbjct: 915 SSTINITCDEGYALIGPESRVCQANGTWSGSNVTC 949
>SB_39600| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1368
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDVFC-LNGWWSDKLPQC 247
VN+TC G+ ++G + C NG WS C
Sbjct: 568 VNITCDTGFHLIGSHSRVCQANGTWSGTTTTC 599
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 50 SASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVM 190
+ SGG L + +HG + NTP + S V ++C GV+
Sbjct: 1206 NTSGGVTLTRNTSHGVTLTRNTPRDVTLTCYTSRDVTLSCNTSRGVI 1252
>SB_13205| Best HMM Match : RCSD (HMM E-Value=4.7)
Length = 302
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 85 SSRLVRGPEHAERYSRPDLRLDPSERDLQAGVRRDGQERRLLLERV 222
S+ LV+ + ++ SR RLDP E DL + D E + L+R+
Sbjct: 24 SALLVQAKPYPKQSSRQTTRLDPGEVDLTEVIDFDNVETKYRLKRM 69
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 167 CKPGYGVMGRNDVFCL-NGWWSDKLPQC 247
C PG ++G + C+ +G WSDK P C
Sbjct: 516 CFPGTQLVGSAVITCMKSGDWSDKTPNC 543
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +1
Query: 22 PVREADAXAFSIRRMRPAPVPSSRLVRGPEHAERYSRPDLRLDPSER 162
P + F R P PVP+ R V P R P L + PS+R
Sbjct: 1558 PAERRVSPPFPAERRTPTPVPAERRVSPP---SRLPPPSLHIRPSDR 1601
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 49 FSIRRMRPAPVPSSRLVRGPEHAERYSRPDLRLDPSER 162
F R PAP P R + P AER P LDP++R
Sbjct: 1487 FPAERRTPAPDPGERQISSPFPAERRIPP---LDPAKR 1521
>SB_42484| Best HMM Match : Sulfate_transp (HMM E-Value=0.00024)
Length = 349
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +1
Query: 79 VPSSRLVRGPEHAERYSRPDLRLDPSERDLQAGVRRDGQERRLLLERVVVGQAASV 246
V +S + G E RYSRP LR++ V R R L +ERV G+ V
Sbjct: 194 VVNSSTLEGGEGVNRYSRP-LRVERVSSGRPLRVERVSTGRPLRVERVSTGRPLRV 248
>SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10)
Length = 206
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 164 TCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
TC+ G + G + + C +G WS P+C
Sbjct: 28 TCQRGLKMQGFSTIVCEDGRWSHDPPRC 55
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Frame = +1
Query: 214 ERVVVGQAASVRPFCTLNSHASVEYKCLLTNGNXGTRPC-GSLXPTGTIVQ-PQCRSPNY 387
ER G+ A V T SV C T+G R G + T + +C+ P
Sbjct: 491 ERDSQGKCADVNECKTGKHDCSVNALCTNTDGTFICRCLRGYIGDGKTCIDFDECKLPKN 550
Query: 388 YSTVPLGYMRCIXGNWDYVATCTPGLSRNGTNVTVLIXVK 507
V CI Y C PG + NG T L VK
Sbjct: 551 DCDVNA---ECINSIGSYSCICKPGFTGNGKTCTDLGPVK 587
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Frame = +1
Query: 214 ERVVVGQAASVRPFCTLNSHASVEYKCLLTNGNXGTRPC-GSLXPTGTIVQ-PQCRSPNY 387
ER G+ A V T SV C T+G R G + T + +C+ P
Sbjct: 34 ERNSQGKCADVNECKTGKHDCSVNALCTNTDGTFICRCLRGYIGDGKTCIDFDECKLPKN 93
Query: 388 YSTVPLGYMRCIXGNWDYVATCTPGLSRNGTNVTVLIXVK 507
V CI Y C PG + NG T L VK
Sbjct: 94 DCDVNA---ECINSIGSYSCICKPGFTGNGKTCTDLGPVK 130
>SB_59607| Best HMM Match : UPF0258 (HMM E-Value=6.6)
Length = 159
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 295 LLTNGNXGTRPCGSLXPTGTIVQPQCRS 378
L+ +G G CG TG ++ P+C++
Sbjct: 17 LVADGRQGKTACGKAFQTGIVLFPECKN 44
>SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 264 ERAERTH*GSLSDHHPFKQKTSFLPITPYPGLQVTFTWIESKVW 133
E E TH + + FK+ T I P P L+ W+ESKVW
Sbjct: 430 EYTEATHSMGGAIGYRFKKWTQRENIRPKP-LKYRDVWVESKVW 472
>SB_36894| Best HMM Match : PXA (HMM E-Value=2.5e-13)
Length = 1252
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 100 RGPEHAERYSRPDLRLDPSERDLQAGVRRDGQERRLLL 213
R PE+A+ S DLR+DP V R RL L
Sbjct: 167 RDPEYAKDLSPRDLRVDPKRDGASCTVLRPSASMRLWL 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,483,558
Number of Sequences: 59808
Number of extensions: 400289
Number of successful extensions: 1231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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