Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0449
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical pr... 28 4.7
U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical pr... 28 6.2
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
protein F36H2.3 protein.
Length = 1388
Score = 36.3 bits (80), Expect = 0.018
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +2
Query: 50 SASGG--CVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGW 223
SAS G C PA+G+ + + + N T Q + C GY + G C NG
Sbjct: 416 SASTGAVCAAIANPANGNLLYMQS-NPTV-QYSSGTSAYLMCNLGYSLSGSVSTLCSNGV 473
Query: 224 WSDKLPQCVRSARSTVMLASSTNVCSPMVTXV 319
WS + QC + + L +T C + T +
Sbjct: 474 WSPSIGQCT----NALALGQTTGNCEAIPTRI 501
Score = 33.9 bits (74), Expect = 0.095
Identities = 22/91 (24%), Positives = 37/91 (40%)
Frame = +2
Query: 29 GKPTXXPSASGGCVLPQYPAHGSYVVLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVF 208
G T + +G C P G+ + ++ P + ++C G V+G + +
Sbjct: 1243 GSCTSSGTGTGPCYTPPLTPVGATLTYSSGYFAPWTAGST--ATMSCPAGQTVIGTSISY 1300
Query: 209 CLNGWWSDKLPQCVRSARSTVMLASSTNVCS 301
C N WS L C S S +++T CS
Sbjct: 1301 CTNSAWSPALGSC--SGSSVGQASTTTTTCS 1329
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 131 GQTFDSIQ-----VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
G TFD+ + +TC GY + G + C+NG ++ L C
Sbjct: 718 GNTFDATRPALTIATLTCNSGYTISGTSTSTCINGVFTPTLGTC 761
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +2
Query: 131 GQTFDSIQ-----VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
G TFD+ + +TC GY + G + C+NG ++ L C
Sbjct: 859 GNTFDATRPALTTATLTCNSGYTISGTSISACMNGVFTPTLGTC 902
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 161 VTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
+TC GY + G + C NG +S L C
Sbjct: 662 LTCNSGYTISGSSQSTCTNGAFSPTLGTC 690
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 161 VTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
+TC GY + G + C NG +S L C
Sbjct: 803 LTCNSGYTISGSSQSTCTNGAFSPTLGTC 831
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 98 YVVLNTPNATPGQTFDSIQ-----VNVTCKPGYGVMGRNDVFCLNGWWSDKLPQC 247
YV+ + G T+D + +TC GY V G + C NG ++ L C
Sbjct: 918 YVINGQITYSQGNTYDITRPAGTTATLTCSSGYTVSGTSVSTCTNGIFTPTLGTC 972
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 104 VLNTPNATPGQTFDSIQVNVTCKPGYGVMGRNDVFCLNGWWS 229
V+ TP A D +V +CKP Y + G + C NG WS
Sbjct: 1190 VVKTPPAA--NYLDGDKVVFSCKPKYYIHGDIERVCRNGTWS 1229
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 343 PTGTIVQPQCRSPNYYSTVPLGYMRCIXGNWDYVATC-TPGLSRNGT 480
P GT+ + C+S + + P +C N ++ A C +PGL G+
Sbjct: 593 PDGTVPETSCQSASNHDHCPSSSHKCTLLNKEHFACCYSPGLVVEGS 639
>Z82056-5|CAB04856.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 364 PQCRSPNYYSTV 399
P+C SPNYYST+
Sbjct: 101 PECMSPNYYSTI 112
>Z81129-9|CAB03410.1| 378|Caenorhabditis elegans Hypothetical
protein T26H5.5 protein.
Length = 378
Score = 28.3 bits (60), Expect = 4.7
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 364 PQCRSPNYYSTV 399
P+C SPNYYST+
Sbjct: 101 PECMSPNYYSTI 112
>U53344-3|AAA96224.1| 702|Caenorhabditis elegans Hypothetical
protein T07H6.4 protein.
Length = 702
Score = 27.9 bits (59), Expect = 6.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 191 GRNDVFCLNGWWSDKLPQCV 250
G+ ++ C NG WS +P C+
Sbjct: 357 GKKELQCYNGVWSSPIPYCI 376
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 155 VNVTCKPGYGVMGRNDV---FCLNGWWSDKLPQCV-RSARSTVML 277
V V C+ GY V C+NG W ++ +C+ +S R + L
Sbjct: 3 VQVICREGYEFASERVVGKSTCVNGKWKPEIAECIPKSCRVPIRL 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,734,492
Number of Sequences: 27780
Number of extensions: 286491
Number of successful extensions: 903
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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