Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0448
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 167 9e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 167 9e-42
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 156 1e-38
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 2e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 105 2e-23
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 71 6e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 71 6e-13
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 68 6e-12
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 68 6e-12
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 68 6e-12
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.004
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.063
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.083
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.15
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.25
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.25
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 33 0.25
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.25
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 33 0.25
Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical pr... 31 0.59
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.4
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40953-1|AAB52646.1| 120|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 167 bits (405), Expect = 9e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREHALLA TLGVKQLIV NKMD
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKMD 156
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 509 STEPPYSEPRFEE-SEGVSSYIRR-WYXP-VCAFVP 607
STEPP+SE RF E + VS +I++ Y P FVP
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVP 192
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 167 bits (405), Expect = 9e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREHALLA TLGVKQLIV NKMD
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKMD 156
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 509 STEPPYSEPRFEE-SEGVSSYIRR-WYXP-VCAFVP 607
STEPP+SE RF E + VS +I++ Y P FVP
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVP 192
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 156 bits (379), Expect = 1e-38
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLI 488
QTREHALLA TLGVKQL+
Sbjct: 132 QTREHALLAQTLGVKQLV 149
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 98.3 bits (234), Expect = 5e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 392
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 509 STEPPYSEPRFEE-SEGVSSYIRR-WYXP-VCAFVP 607
STEPP+SE RF E + VS +I++ Y P FVP
Sbjct: 123 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVP 158
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 116 bits (278), Expect = 2e-26
Identities = 54/88 (61%), Positives = 66/88 (75%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 235 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLN 518
QT+EHALL +LGV QLIV VNK+D ++
Sbjct: 295 QTKEHALLLRSLGVTQLIVAVNKLDTVD 322
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 232 KAERE 246
+ ERE
Sbjct: 227 EEERE 231
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 116 bits (278), Expect = 2e-26
Identities = 54/88 (61%), Positives = 66/88 (75%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 253 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
Query: 435 QTREHALLAFTLGVKQLIVGVNKMDPLN 518
QT+EHALL +LGV QLIV VNK+D ++
Sbjct: 313 QTKEHALLLRSLGVTQLIVAVNKLDTVD 340
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 232 KAERE 246
+ ERE
Sbjct: 245 EEERE 249
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 105 bits (253), Expect = 2e-23
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QTREH++L T GVK L++ VNKMD
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKMD 258
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 46 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 226 KLKAERE 246
ERE
Sbjct: 164 TNDEERE 170
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.3 bits (167), Expect = 6e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QT+EH +LA +GVK + + +NK D
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.3 bits (167), Expect = 6e-13
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 435 QTREHALLAFTLGVKQLIVGVNKMD 509
QT+EH +LA +GVK + + +NK D
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKAD 172
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 68.1 bits (159), Expect = 6e-12
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 151
Query: 435 QTREHALLAFTLGV--KQLIVGVNKMDPL----NHHTVSPDLRNQ 551
QTREH LLA +GV ++V +NK+D + V D+R Q
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETRELVEMDIREQ 196
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 68.1 bits (159), Expect = 6e-12
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 435 QTREHALLAFTLGV--KQLIVGVNKMDPL----NHHTVSPDLRNQ 551
QTREH LLA +GV ++V +NK+D + V D+R Q
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETRELVEMDIREQ 197
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 68.1 bits (159), Expect = 6e-12
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 435 QTREHALLAFTLGV--KQLIVGVNKMDPL----NHHTVSPDLRNQ 551
QTREH LLA +GV ++V +NK+D + V D+R Q
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETRELVEMDIREQ 197
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.9 bits (94), Expect = 4e-04
Identities = 36/101 (35%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 479
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 480 QLIVGVNKMDPLNHHTVSPDLRNQKEYPHTSED--GTXQCV 596
QL+V VNK+D N + +R+ E+ E G QCV
Sbjct: 258 QLVVAVNKIDKPNADPMRA-MRSLLEHDVVVEQLGGDVQCV 297
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 479
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 480 QLIVGVNKMDPLNHHTVSPDLRNQKE 557
++I+ +NK D +S + ++
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.063
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 473
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 474 VKQLIVGVNKMD 509
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 183
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGI 144
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 476
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 477 KQLIVGVNKMD 509
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 502 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 374
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGID 147
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 479
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 480 QLIVGVNKMD 509
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GGYYTQ-FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
G +T+ ++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 120 GSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 485
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 486 IVGVNKMDPLNHHTVSP 536
++ +NK+D L + +P
Sbjct: 605 VIALNKIDRLYEYESNP 621
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GGYYTQ-FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 129
G +T+ ++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 120 GSLFTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical
protein C08F11.10 protein.
Length = 261
Score = 31.5 bits (68), Expect = 0.59
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 507 DPLNHHTVSPDLRNQK-EYPHTSEDGTXQC--VLSCHSGCTRQHVELHQMLGQGAVTKXQ 677
D NH S L+ +K + SED +C V S S C R H L ML + AVT Q
Sbjct: 25 DNANHGIFSSILKRKKRQQDKLSEDVKKRCGRVESYKSCCDRLHQALMYMLVENAVTSKQ 84
Query: 678 L 680
L
Sbjct: 85 L 85
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 258 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 258 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 29.1 bits (62), Expect = 3.1
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 479
+ +ID+PGH DF + + +D A+L++ + GI QT E + +
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI-----DVIEGIC--SQT-EALIRQVIRNGQ 136
Query: 480 QLIVGVNKMDPLNHHTVSPDLRNQKEYPHTSE--DGTXQCV 596
+I+ +NK+D L V + + + Y H S +G C+
Sbjct: 137 AMILVINKIDRLR---VELKMSSSEAYQHMSRLIEGVNSCI 174
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 29.1 bits (62), Expect = 3.1
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 479
+ +ID+PGH DF + + +D A+L++ + GI QT E + +
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI-----DVIEGIC--SQT-EALIRQVIRNGQ 136
Query: 480 QLIVGVNKMDPLNHHTVSPDLRNQKEYPHTSE--DGTXQCV 596
+I+ +NK+D L V + + + Y H S +G C+
Sbjct: 137 AMILVINKIDRLR---VELKMSSSEAYQHMSRLIEGVNSCI 174
>U40953-1|AAB52646.1| 120|Caenorhabditis elegans Hypothetical
protein F53B1.3 protein.
Length = 120
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 483 LIVGVNKMDPLNHHTVSPDLRNQKEYPHTSEDGTXQCVLSCHSGCTRQHVE 635
L+V K + ++ +R+ + HT D C+ C +GCT+QH E
Sbjct: 10 LVVFAWKSEIVSTRNAVHTVRHDIAFVHTF-DTREMCMSRCRTGCTQQHSE 59
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 64 INIVVIGHVDSGKSTTT 114
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 300 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 395
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,772
Number of Sequences: 27780
Number of extensions: 320263
Number of successful extensions: 969
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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