Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0447
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   1.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   5.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.0  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 203 VNKLIRNNKMNCMEYAYRYGCK 268
           VNK + N+ M      YRY C+
Sbjct: 269 VNKSMLNSHMKSHSNVYRYSCR 290


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 203 VNKLIRNNKMNCMEYAYRYGCK 268
           VNK + N+ M      YRY C+
Sbjct: 27  VNKSMLNSHMKSHSNVYRYSCR 48


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 341 SLMLFSAKISLNSTGKHSRTISLEPCIH 258
           SL+L S   +L    KH R   L PC++
Sbjct: 9   SLVLISKIFALLPVKKHHRLEKLVPCVY 36


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +1

Query: 295 FPVEFRLIFAENNIKLMYK 351
           FP+++ L+F+E  + L++K
Sbjct: 701 FPIDYSLVFSETKL-LLFK 718


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 334 IKLMYKRDGLALTLRDDSNNDGXLAYGDGKDKTSPKV 444
           IKL+ +++       D++  +     G+ KDK  PK+
Sbjct: 211 IKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 218 RNNKMNCMEYAYRYGCKA 271
           R N+  C E  Y YG  A
Sbjct: 23  RKNRTTCPEKIYAYGVVA 40


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 218 RNNKMNCMEYAYRYGCKA 271
           R N+  C E  Y YG  A
Sbjct: 23  RKNRTTCPEKIYAYGVVA 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,986
Number of Sequences: 336
Number of extensions: 1654
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)