Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0447
(535 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81992-1|AAC34250.1| 411|Homo sapiens C2H2 zinc finger protein ... 29 7.8
U72621-1|AAB67041.1| 463|Homo sapiens lost on transformation LO... 29 7.8
BX537397-1|CAD97639.1| 411|Homo sapiens hypothetical protein pr... 29 7.8
BC109086-1|AAI09087.1| 463|Homo sapiens pleiomorphic adenoma ge... 29 7.8
BC109085-1|AAI09086.1| 463|Homo sapiens pleiomorphic adenoma ge... 29 7.8
BC074814-1|AAH74814.1| 463|Homo sapiens pleiomorphic adenoma ge... 29 7.8
AL049844-7|CAB56564.1| 463|Homo sapiens pleiomorphic adenoma ge... 29 7.8
AL049844-5|CAI21447.1| 411|Homo sapiens pleiomorphic adenoma ge... 29 7.8
AJ311395-1|CAC39615.1| 463|Homo sapiens zinc finger protein pro... 29 7.8
AJ303119-1|CAC39614.1| 411|Homo sapiens ZAC delta 2 protein pro... 29 7.8
AJ006354-1|CAA06994.1| 463|Homo sapiens zinc finger protein pro... 29 7.8
>U81992-1|AAC34250.1| 411|Homo sapiens C2H2 zinc finger protein
PLAGL1 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 239 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 267
>U72621-1|AAB67041.1| 463|Homo sapiens lost on transformation LOT1
protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>BX537397-1|CAD97639.1| 411|Homo sapiens hypothetical protein
protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 239 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 267
>BC109086-1|AAI09087.1| 463|Homo sapiens pleiomorphic adenoma
gene-like 1 protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>BC109085-1|AAI09086.1| 463|Homo sapiens pleiomorphic adenoma
gene-like 1 protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>BC074814-1|AAH74814.1| 463|Homo sapiens pleiomorphic adenoma
gene-like 1 protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>AL049844-7|CAB56564.1| 463|Homo sapiens pleiomorphic adenoma
gene-like 1 protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>AL049844-5|CAI21447.1| 411|Homo sapiens pleiomorphic adenoma
gene-like 1 protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 239 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 267
>AJ311395-1|CAC39615.1| 463|Homo sapiens zinc finger protein
protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
>AJ303119-1|CAC39614.1| 411|Homo sapiens ZAC delta 2 protein
protein.
Length = 411
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 239 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 267
>AJ006354-1|CAA06994.1| 463|Homo sapiens zinc finger protein
protein.
Length = 463
Score = 29.5 bits (63), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 66 PTKPQSPIPNSKTIFTTASSLPITTMPLK 152
P P P+PN K T+ S P+ ++PLK
Sbjct: 291 PGSPPPPLPNHKYNTTSTSYSPLASLPLK 319
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,349,043
Number of Sequences: 237096
Number of extensions: 984739
Number of successful extensions: 2647
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -