Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0447
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061052-1|AAL28600.1|  511|Drosophila melanogaster LD02194p pro...    28   9.2  
AF105063-1|AAD16891.1|  511|Drosophila melanogaster Rab escort p...    28   9.2  
AE013599-2914|AAF57544.1|  511|Drosophila melanogaster CG8432-PA...    28   9.2  

>AY061052-1|AAL28600.1|  511|Drosophila melanogaster LD02194p
           protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 333 VVFGENKSELNREALPDDILGALH 262
           VV GE+ S LN   LP+D+   LH
Sbjct: 475 VVDGEDPSALNEHTLPEDLRAQLH 498


>AF105063-1|AAD16891.1|  511|Drosophila melanogaster Rab escort
           protein homolog protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 333 VVFGENKSELNREALPDDILGALH 262
           VV GE+ S LN   LP+D+   LH
Sbjct: 475 VVDGEDPSALNEHTLPEDLRAQLH 498


>AE013599-2914|AAF57544.1|  511|Drosophila melanogaster CG8432-PA
           protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 333 VVFGENKSELNREALPDDILGALH 262
           VV GE+ S LN   LP+D+   LH
Sbjct: 475 VVDGEDPSALNEHTLPEDLRAQLH 498


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,352,072
Number of Sequences: 53049
Number of extensions: 329596
Number of successful extensions: 1177
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)