Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0447
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical pr...    31   0.69 
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    30   0.91 
Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical
           protein F08G12.1 protein.
          Length = 635

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 50  VASLYANETSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 190
           +  L  N++ +  S  E D Y     ADYD  +E   + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +1

Query: 271 SKDIVRECFPVEFRLIFAENNIKLMYKRDGLALTLRDDSNNDGXLAYGDGKDKTSPKVSW 450
           +  ++RECFP    +I    +   +Y ++G+   +  DS  DG L +     K+S +   
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602

Query: 451 KFVPL 465
            FV L
Sbjct: 603 SFVNL 607


>Z81560-7|CAB76737.2|  188|Caenorhabditis elegans Hypothetical
           protein K02E2.8a protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 60  CMPTKPQSPIPNSKTIFTTASSLPITTMPLKKAN 161
           C+PT+  +P+       TT  S P TT+P+   N
Sbjct: 14  CIPTQFVTPLNPGTITTTTTISAPTTTVPITTTN 47


>Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical
           protein C47E8.3 protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 199 CRKQTHTKQQDELHGVRLPLWMQGSK 276
           C +  HT   D LHG+R+   M  SK
Sbjct: 329 CNRLIHTASVDTLHGMRITCLMGNSK 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,380,620
Number of Sequences: 27780
Number of extensions: 164886
Number of successful extensions: 694
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)