Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0446
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 112 3e-25
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 112 3e-25
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 112 3e-25
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 112 3e-25
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 112 3e-25
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 112 3e-25
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 112 3e-25
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 112 3e-25
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 106 2e-23
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 104 7e-23
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 57 1e-08
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 52 4e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 37 0.012
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.58
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.58
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.58
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 0.77
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 0.77
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 249 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 300
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 302 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 235 SYNSIMKCDIDIRK 248
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 279 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 330
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 332 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 265 SYNSIMKCDIDIRK 278
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 112 bits (269), Expect = 3e-25
Identities = 52/52 (100%), Positives = 52/52 (100%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 344
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 346 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 106 bits (254), Expect = 2e-23
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGG
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGG 343
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
+YNSIMKCD+ IRK
Sbjct: 279 SYNSIMKCDIDIRK 292
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 104 bits (249), Expect = 7e-23
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
DLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGG
Sbjct: 292 DLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGG 343
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1
Query: 549 TYNSIMKCDVXIRK 508
TY SIMKCDV IRK
Sbjct: 278 TYQSIMKCDVDIRK 291
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG 353
LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGG
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGG 342
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKCF 258
I ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 344 IVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 11/63 (17%)
Frame = -3
Query: 508 DLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVW 362
D Y + VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V+
Sbjct: 296 DFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVF 355
Query: 361 IGG 353
+GG
Sbjct: 356 LGG 358
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2
Query: 350 IXASLSTFQQMWISKQEYDESGPSIVHRKC 261
I SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 406 ILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGG 353
L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGG
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGG 404
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 356
LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLG 520
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 16/67 (23%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERK 374
LY N VLSGG+TM+ A ++Q+++ L+ P + +++I+ ++
Sbjct: 322 LYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQR 381
Query: 373 YSVWIGG 353
Y+VW GG
Sbjct: 382 YAVWFGG 388
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 362 PYGVLPLWRSNDLNLHCRWGESCD 433
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.77
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 395
L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.77
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 395
L N ++ GG++ +PG +R+++E+ ++ P+ + +
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 505 LYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKII 392
L+ N +L+GG + PG+ R+++EI + + KI +I
Sbjct: 209 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,558,290
Number of Sequences: 27780
Number of extensions: 253864
Number of successful extensions: 615
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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