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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0444
         (482 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo...   102   5e-21
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo...   100   2e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L...    89   5e-17
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti...    87   3e-16
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu...    81   1e-14
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug...    80   2e-14
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol...    79   7e-14
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b...    75   6e-13
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n...    74   2e-12
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ...    73   3e-12
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu...    73   5e-12
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E...    65   9e-10
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli...    59   4e-08
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal...    58   1e-07
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL...    55   1e-06
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich...    52   5e-06
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo...    50   4e-05
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar...    45   8e-04
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ...    44   0.002
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea...    38   0.16 
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea...    37   0.21 
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;...    36   0.48 
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ...    36   0.48 
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc...    35   0.84 
UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3; ...    33   2.6  
UniRef50_UPI0000D55922 Cluster: PREDICTED: similar to CG6178-PA;...    33   3.4  
UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea...    33   4.5  
UniRef50_O81821 Cluster: Heat stress transcription factor A-1b; ...    33   4.5  
UniRef50_Q1M4X6 Cluster: Putative permease component of ABC tran...    32   5.9  
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen...    32   5.9  
UniRef50_Q4K700 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  

>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
           Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
           (Human)
          Length = 427

 Score =  102 bits (244), Expect = 5e-21
 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
 Frame = +3

Query: 75  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
           ++ ARPL+SVYSEK E+  G    LP VFKAPIRPD+VN VH ++ KN+RQPY V+  L 
Sbjct: 1   MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58

Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
            +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 59  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89



 Score = 73.7 bits (173), Expect = 2e-12
 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK WRRWHRRVN  Q 
Sbjct: 61  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120

Query: 433 RXA 441
           R A
Sbjct: 121 RYA 123


>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
           Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
           melanogaster (Fruit fly)
          Length = 401

 Score =  100 bits (239), Expect = 2e-20
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRR 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y V+  
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS-E 59

Query: 249 LVPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
           L  +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 92



 Score = 69.7 bits (163), Expect = 3e-11
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHR+VN+ Q 
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 433 RXA 441
           R A
Sbjct: 124 RYA 126


>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
           Leishmania major strain Friedlin|Rep: Ribosomal protein
           L1a, putative - Leishmania major strain Friedlin
          Length = 432

 Score = 89.0 bits (211), Expect = 5e-17
 Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = +3

Query: 84  ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLVPN- 260
           ARP VSVYS  S++V G   PLP VF APIR D+V  VH +M+KNSRQ Y V R    N 
Sbjct: 3   ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61

Query: 261 QCRIMGYGRAVARIPRVRGGGNHXSG 338
                G GRAVARIPR+ GGG   SG
Sbjct: 62  SAHSWGTGRAVARIPRISGGGTSTSG 87



 Score = 62.9 bits (146), Expect = 4e-09
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 343 SFGNMCRGGRMFAPTKPWRRWHRRVNLRQXRXA 441
           +FGNMCRGGRMFAPTK +RRWHR++NL Q R A
Sbjct: 90  AFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFA 122


>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
           Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
           Sclerotinia sclerotiorum 1980
          Length = 373

 Score = 86.6 bits (205), Expect = 3e-16
 Identities = 45/87 (51%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +3

Query: 84  ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPN 260
           +RP VSV S    T  G   PLP VF +PIRPD+V  VH  M+KN RQPY V+ +     
Sbjct: 3   SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61

Query: 261 QCRIMGYGRAVARIPRVRGGGNHXSGK 341
                G GRAVARIPRV GGG H +G+
Sbjct: 62  SAESWGTGRAVARIPRVSGGGTHRAGQ 88



 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXRS-FGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   ++ FGNMCR GRMFAPTK WR+WH+++NL Q 
Sbjct: 60  QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQK 119

Query: 433 RXA 441
           R A
Sbjct: 120 RFA 122


>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
           putative; n=2; Theileria|Rep: 60S ribosomal subunit
           protein L4/L1, putative - Theileria annulata
          Length = 426

 Score = 81.0 bits (191), Expect = 1e-14
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 81  VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VP 257
           V RP+VSV+S  +E   G+   +P VF  P+R DLV+ VH +MSKN RQ Y ++R     
Sbjct: 2   VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60

Query: 258 NQCRIMGYGRAVARIPRVRGGGNHXSGK 341
              R  G GRA++R PRV+GGG H SG+
Sbjct: 61  TSARSWGTGRALSRTPRVKGGGTHRSGQ 88



 Score = 60.9 bits (141), Expect = 1e-08
 Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSA SWGT   LS                ++ N CR G MFAPT+ WR WHR++NL++ 
Sbjct: 60  QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEK 119

Query: 433 RXA 441
           R A
Sbjct: 120 RLA 122


>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
           malayi (Filarial nematode worm)
          Length = 306

 Score = 80.2 bits (189), Expect = 2e-14
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = +3

Query: 102 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRIMG 278
           VY++KSE      + LP VF+AP+RPD+V+ VH  + KN RQPY V+            G
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185

Query: 279 YGRAVARIPRVRGGGNHXSGK 341
            GRAVARIPRVRGGG H SG+
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQ 206



 Score = 70.1 bits (164), Expect = 2e-11
 Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHRRVN+ Q 
Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWHRRVNVAQK 237

Query: 433 RXA 441
           R A
Sbjct: 238 RYA 240


>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
           Oligohymenophorea|Rep: Ribosomal protein L4, putative -
           Paramecium tetraurelia
          Length = 406

 Score = 78.6 bits (185), Expect = 7e-14
 Identities = 42/86 (48%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +3

Query: 90  PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQ 263
           PLVSV+S    T V     PLP VF+ PIRPD+V+ VH +++KN RQ + V  +  + + 
Sbjct: 5   PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64

Query: 264 CRIMGYGRAVARIPRVRGGGNHXSGK 341
               G GRAVARIPRV G G H SG+
Sbjct: 65  AESWGTGRAVARIPRVSGSGTHRSGQ 90



 Score = 60.1 bits (139), Expect = 3e-08
 Identities = 30/63 (47%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXRS-FGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           Q SAESWGT                   ++ FGN CR GRM  P K WRRWHRRVN++Q 
Sbjct: 62  QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQK 121

Query: 433 RXA 441
           R A
Sbjct: 122 RHA 124


>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
           bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
          Length = 360

 Score = 75.4 bits (177), Expect = 6e-13
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +3

Query: 87  RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQ 263
           RP VSV++       GA   +P VF AP+R DLV  VH +MSKN RQ Y V++       
Sbjct: 4   RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62

Query: 264 CRIMGYGRAVARIPRVRGGGNHXSGK 341
            R  G GRA+AR+PRV+GGG H +G+
Sbjct: 63  ARSWGTGRAMARVPRVKGGGTHRAGQ 88



 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSA SWGT   ++                ++ N CR G M+APT+ WRRWHR+VNL++ 
Sbjct: 60  QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEK 119

Query: 433 RXA 441
           R A
Sbjct: 120 RQA 122


>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
           Cryptosporidium|Rep: 60S ribosomal protein-like,
           putative - Cryptosporidium parvum Iowa II
          Length = 394

 Score = 73.7 bits (173), Expect = 2e-12
 Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +3

Query: 75  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV-TRRL 251
           ++ ARP+VSV+     T   ++ PLP VF +P+R DLV  V  +MSKN RQ Y V T+  
Sbjct: 1   MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60

Query: 252 VPNQCRIMGYGRAVARIPRVRGGGNHXSGK 341
             +     G GRAVARIPRV   G   SG+
Sbjct: 61  HQHSAESWGTGRAVARIPRVSASGTSRSGQ 90



 Score = 55.2 bits (127), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           Q SAESWGT                   + +FGNMCRGG MF+P K +RR+HR++N  + 
Sbjct: 62  QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEK 121

Query: 433 RXA 441
           R A
Sbjct: 122 RHA 124


>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 349

 Score = 72.9 bits (171), Expect = 3e-12
 Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 217 TRGSLTA*QGGWSQTSAESWGTDVLSPEFLXXXXXXXXXXXRS-FGNMCRGGRMFAPTKP 393
           T+ +LT       QTSAESWGT                   ++ FGNMCR GRMFAPTK 
Sbjct: 24  TKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKV 83

Query: 394 WRRWHRRVNLRQXRXAXQQPXLLPASNAL 480
           WR+WH+++NL Q R A         S AL
Sbjct: 84  WRKWHQKINLNQKRFATASALAASGSPAL 112


>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
           putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
           protein L4/L1, putative - Plasmodium chabaudi
          Length = 411

 Score = 72.5 bits (170), Expect = 5e-12
 Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = +3

Query: 75  LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL- 251
           ++  RPL +VY    + V G  + +P VF+ PIR DL+  +  +MSKN R PY V     
Sbjct: 1   MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59

Query: 252 VPNQCRIMGYGRAVARIPRVRGGGNHXSGK 341
                   G GRAVARIPRV GGG H +G+
Sbjct: 60  YETSAESWGTGRAVARIPRVPGGGTHRAGQ 89



 Score = 63.7 bits (148), Expect = 2e-09
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 244 GGWSQTSAESWGTDVLSPEFLXXXXXXXXXXXRS-FGNMCRGGRMFAPTKPWRRWHRRVN 420
           G   +TSAESWGT                   ++ FGNMCRGG MF PTK WRRW R++N
Sbjct: 57  GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116

Query: 421 LRQXRXA 441
           L++ R A
Sbjct: 117 LKEKRYA 123


>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
           Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
           protein L4 - Entamoeba histolytica HM-1:IMSS
          Length = 431

 Score = 64.9 bits (151), Expect = 9e-10
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = +3

Query: 84  ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLVPNQ 263
           +RP V++Y   +   +     LP VF APIR D+V+ V+ + SKN+RQP  V+ +     
Sbjct: 3   SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62

Query: 264 CRI-MGYGRAVARIPRVRGGGNHXSGK 341
             I  G GRAVARIPR+ G G+  +G+
Sbjct: 63  SAISWGTGRAVARIPRISGSGSGRNGQ 89



 Score = 38.3 bits (85), Expect = 0.090
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           Q SA SWGT                   + +FGNM R G MF+P K +R+W R+   +  
Sbjct: 61  QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120

Query: 433 RXA 441
           R A
Sbjct: 121 RFA 123


>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
           ATCC 50803
          Length = 316

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +3

Query: 90  PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQC 266
           P V V+      V  A  P P VF  P+RPD++N VH  + K  R PY V+R   V    
Sbjct: 3   PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60

Query: 267 RIMGYGRAVARIPRVRGG 320
              G GRAVAR+PR  GG
Sbjct: 61  HSWGPGRAVARLPRKHGG 78



 Score = 39.9 bits (89), Expect = 0.029
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +1

Query: 343 SFGNMCRGGRMFAPTKPWRRWHRRVNLRQXRXAXQQPXLLPASNAL 480
           ++ N  RGG M  PT   RRW R+VNL Q R A        A+ AL
Sbjct: 81  AYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAAL 126


>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
           Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
           Encephalitozoon cuniculi
          Length = 335

 Score = 58.0 bits (134), Expect = 1e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 96  VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRI 272
           ++ Y     TV+     LP VF  PIR DLV   +      +RQPY V++   + +    
Sbjct: 5   INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63

Query: 273 MGYGRAVARIPRVRGGGNHXSGK 341
            G GRA+AR+PRV+GGG   +G+
Sbjct: 64  WGTGRAIARVPRVKGGGTRRAGQ 86



 Score = 41.5 bits (93), Expect = 0.010
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +1

Query: 214 RTRGSLTA*QGGWSQTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTK 390
           +TR      +    Q SAESWGT   ++                +F N CR GRM  PTK
Sbjct: 44  KTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTK 103

Query: 391 PWRRWHRRV 417
             RRW R+V
Sbjct: 104 THRRWARKV 112


>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
           Streblomastix strix
          Length = 492

 Score = 54.8 bits (126), Expect = 1e-06
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
 Frame = +3

Query: 93  LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLVPNQ--C 266
           L +VY+   +     A P    + +PIRPD+V+ VH++++KN RQP+     L  +Q   
Sbjct: 7   LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF-GRYYLAGHQHSA 64

Query: 267 RIMGYGRAVARIPRVRGGGNHXSGK 341
              G GRAVAR+PR+ G G   +G+
Sbjct: 65  ESWGTGRAVARVPRISGSGTSRNGQ 89



 Score = 53.6 bits (123), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           Q SAESWGT   ++                +F N  RGG M++P K WRRWHR VN+ Q 
Sbjct: 61  QHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQR 120

Query: 433 RXA 441
           R A
Sbjct: 121 RFA 123


>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
           Trichomonas vaginalis G3|Rep: Ribosomal protein,
           putative - Trichomonas vaginalis G3
          Length = 370

 Score = 52.4 bits (120), Expect = 5e-06
 Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +3

Query: 81  VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLVPN 260
           ++R  V+V +++ +  + +   LP VF  PIR ++V +V+V+++KN++QP+         
Sbjct: 1   MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58

Query: 261 QCRI-MGYGRAVARIPRVRGGGNHXSGK 341
              I  G GRA A +PRV G G++ +G+
Sbjct: 59  VSAISWGTGRAKACVPRVNGSGSNRNGQ 86



 Score = 34.7 bits (76), Expect = 1.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 343 SFGNMCRGGRMFAPTKPWRRWHRRVNLRQXRXA 441
           ++ N CRGG  F P    RRW R V  RQ + A
Sbjct: 88  AYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFA 120


>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
           Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
           Guillardia theta (Cryptomonas phi)
          Length = 255

 Score = 49.6 bits (113), Expect = 4e-05
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 259 TSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQXR 435
           TSA SWGT   +S                +  N CRGGR+F PT  WR+WH ++N  Q +
Sbjct: 57  TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRK 116

Query: 436 XA 441
            A
Sbjct: 117 SA 118


>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
           Euryarchaeota|Rep: 50S ribosomal protein L4P -
           Methanopyrus kandleri
          Length = 260

 Score = 45.2 bits (102), Expect = 8e-04
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +3

Query: 90  PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQC 266
           P+ ++  E+ +TV+     LP  F+ P+R DL+    ++   N RQPY    R       
Sbjct: 4   PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58

Query: 267 RIMGYGRAVARIPRVRGGGNHXSGKVLR 350
              G G  VA +PRV+G  +  +G+  R
Sbjct: 59  ESWGAGHGVAMVPRVKGRRHPAAGRAAR 86


>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
           protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
           similar to ribosomal protein L4 - Canis familiaris
          Length = 248

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 180 DLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRIMGYGRAVARIPRVRGGGNHXSGKVL 347
           D+VN VH ++ KN  QPY V+            G GRA   +PRVRGGG     +VL
Sbjct: 25  DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGGLTILARVL 81


>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
           Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
           aerophilum
          Length = 283

 Score = 37.5 bits (83), Expect = 0.16
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 150 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRIMGYGRAVARIPRVRG 317
           P  F  PIRPDL+   ++S      QP  V       + C   G G  +ARIPR +G
Sbjct: 45  PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKG 101


>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
           Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
           pernix
          Length = 272

 Score = 37.1 bits (82), Expect = 0.21
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +3

Query: 93  LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLVPNQCRI 272
           +V VY E+          LP +F+ P+R DL+    +S      QP             +
Sbjct: 15  IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72

Query: 273 -MGYGRAVARIPRVRG 317
            +G GR VAR+PR++G
Sbjct: 73  SLGVGRGVARVPRIKG 88


>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
           Ostreococcus tauri|Rep: Ribosomal protein
           RPL1/RPL2/RL4L4 - Ostreococcus tauri
          Length = 404

 Score = 35.9 bits (79), Expect = 0.48
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +3

Query: 132 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 218
           GA+  +P VF +PIR D+VN VH  ++KN
Sbjct: 15  GASCAMPEVFLSPIRADIVNAVHTGLAKN 43



 Score = 33.5 bits (73), Expect = 2.6
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 394 WRRWHRRVNLRQXRXA 441
           WRRWHRRVN+++ R A
Sbjct: 111 WRRWHRRVNIKEKRYA 126


>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major strain Friedlin
          Length = 534

 Score = 35.9 bits (79), Expect = 0.48
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 312 RGGGNHXSGKVLR*HVSWWTYVRPHEALAALAPSRQP 422
           R    H   + +R HV WW +VR  E L  LAP  QP
Sbjct: 132 RRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168


>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
           Euryarchaeota|Rep: 50S ribosomal protein L4P -
           Methanosphaera stadtmanae (strain DSM 3091)
          Length = 259

 Score = 35.1 bits (77), Expect = 0.84
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 96  VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRI 272
           ++VYS K +  +     LP +F+   RPD++    +SM     QP+              
Sbjct: 4   INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61

Query: 273 MGYGRAVARIPRVRG 317
            G GR  A +PRV+G
Sbjct: 62  FGSGRGAAMVPRVKG 76


>UniRef50_A2X658 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 411

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +2

Query: 95  SVGVFREERDGAGCSQAPPVRVQGAHTSGPGQ*CXRFYVQELEAALLRDKE 247
           SVG   E RDGAG  + PP   + A  +   Q      VQELEA L ++++
Sbjct: 211 SVGEDEETRDGAGHDEPPPAPAEPASEAALAQ-AQLAQVQELEAKLQQERQ 260


>UniRef50_UPI0000D55922 Cluster: PREDICTED: similar to CG6178-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG6178-PA - Tribolium castaneum
          Length = 544

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 210 SKNSRQPYCVTRRLVPNQCRIMGYGRAVARIPRVRGGGNHXSGKVLR*HVSWWTYV 377
           S+N  +  C    LV + C ++GY + +     V  GG   +G + R   S W Y+
Sbjct: 374 SRNDVEVECSGELLVTSDCLMLGYFKNMGATQTVMEGGYFKTGDLARYDASGWLYI 429


>UniRef50_A4CKW9 Cluster: Putative uncharacterized protein; n=1;
           Robiginitalea biformata HTCC2501|Rep: Putative
           uncharacterized protein - Robiginitalea biformata
           HTCC2501
          Length = 481

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -2

Query: 316 PRTRGIRATARPYPMIRH--WFGTSLLVTQ*GCLEFLDIETXTSLTRSGR 173
           P  + +RATAR   ++R   W    LL+ Q GC+E +DIET  +  +  R
Sbjct: 21  PLPKLLRATARVPKLLRAAVWLPVLLLLPQLGCVEEVDIETDDASIQQAR 70


>UniRef50_UPI0000F2E379 Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 384

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = -3

Query: 186 PGPDVWAP*TRTGGAWLHP--APSRSSLNTPTLKVGLPIDSFRYFSEAIPPKY 34
           P   VW P   T G W  P  AP R S  TP    G P+ S R      PP +
Sbjct: 95  PQRAVWEPGKATAGCWGPPRAAPGRESTGTPCRDPGDPLRSHRAPLHEWPPPH 147


>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
           Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
           solfataricus
          Length = 267

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 147 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL-VPNQCRIMGYGRAVARIPRVRGGG 323
           LP +F  P+R DL+  V ++   +S QP                G    +AR+PRV+  G
Sbjct: 25  LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKNSG 84


>UniRef50_O81821 Cluster: Heat stress transcription factor A-1b;
           n=2; Arabidopsis thaliana|Rep: Heat stress transcription
           factor A-1b - Arabidopsis thaliana (Mouse-ear cress)
          Length = 481

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -1

Query: 377 NIRPPRHMLPKDLXXXXXXXXXXTRNSGDSTSVPHDSALVWDQPPCHAVRLPRVLGHRNV 198
           +I PP + +P  L            N   S S  ++S +VW  P    V LP+   H N 
Sbjct: 17  SIPPPVNSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNF 76

Query: 197 -XIIDQVRTYG 168
              + Q+ TYG
Sbjct: 77  SSFVRQLNTYG 87


>UniRef50_Q1M4X6 Cluster: Putative permease component of ABC
           transporter; n=1; Rhizobium leguminosarum bv. viciae
           3841|Rep: Putative permease component of ABC transporter
           - Rhizobium leguminosarum bv. viciae (strain 3841)
          Length = 291

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 325 LPPPRTRGIRATARPYPMIRHWFGTSLL 242
           LP P    + A + PYP   HW GT +L
Sbjct: 54  LPSPTDSDVLAMSDPYPSAAHWLGTDIL 81


>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr13 scaffold_48, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 131

 Score = 32.3 bits (70), Expect = 5.9
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -1

Query: 386 VGANIRPPRHMLPK 345
           VGANI PPRHMLPK
Sbjct: 107 VGANILPPRHMLPK 120


>UniRef50_Q4K700 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens Pf-5|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens
           (strain Pf-5 / ATCC BAA-477)
          Length = 98

 Score = 31.9 bits (69), Expect = 7.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 319 PPRTRGIRATARPYPMIRHWFGTSLLVTQ*GCL 221
           P R + +R   +PYP   H F   LLVTQ GCL
Sbjct: 27  PARIKVLRMDGQPYPEETHDFNEGLLVTQ-GCL 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,753,934
Number of Sequences: 1657284
Number of extensions: 9977402
Number of successful extensions: 27390
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27348
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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