Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0444
(482 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 106 5e-23
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 102 6e-22
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 102 8e-22
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 102 8e-22
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 2.1
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 106 bits (254), Expect = 5e-23
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQCRI--MGYGRAVARIPRVRGGGNHXSGK 341
+Q R G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 71.7 bits (168), Expect = 1e-12
Identities = 35/63 (55%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QT AESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 102 bits (245), Expect = 6e-22
Identities = 54/92 (58%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Frame = +3
Query: 72 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL 251
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-EL 71
Query: 252 VPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 72 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 103
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 134
Query: 433 RXA 441
R A
Sbjct: 135 RYA 137
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 102 bits (244), Expect = 8e-22
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +3
Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58
Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
+Q G GRAVARIPRVRGGG H SG+
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89
Score = 73.7 bits (173), Expect = 3e-13
Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 433 RXA 441
R A
Sbjct: 121 RYA 123
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 71 ESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTS 178
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,617,871
Number of Sequences: 237096
Number of extensions: 1577135
Number of successful extensions: 3903
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3861
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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