BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0444 (482 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 106 5e-23 AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 102 6e-22 D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 102 8e-22 BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 102 8e-22 AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 102 8e-22 AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 2.1 >L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 protein. Length = 426 Score = 106 bits (254), Expect = 5e-23 Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQCRI--MGYGRAVARIPRVRGGGNHXSGK 341 +Q R G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 71.7 bits (168), Expect = 1e-12 Identities = 35/63 (55%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QT AESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 variant protein. Length = 441 Score = 102 bits (245), Expect = 6e-22 Identities = 54/92 (58%), Positives = 66/92 (71%), Gaps = 2/92 (2%) Frame = +3 Query: 72 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL 251 +++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-EL 71 Query: 252 VPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 72 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 103 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 134 Query: 433 RXA 441 R A Sbjct: 135 RYA 137 >D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 variant protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 protein. Length = 427 Score = 102 bits (244), Expect = 8e-22 Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +3 Query: 75 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRLV 254 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V+ L Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS-ELA 58 Query: 255 PNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341 +Q G GRAVARIPRVRGGG H SG+ Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 89 Score = 73.7 bits (173), Expect = 3e-13 Identities = 36/63 (57%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +1 Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432 QTSAESWGT + +FGNMCRGGRMFAPTK WRRWHRRVN Q Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 433 RXA 441 R A Sbjct: 121 RYA 123 >AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting protein protein. Length = 250 Score = 31.1 bits (67), Expect = 2.1 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 71 ESIGSPTFSVGVFREERDGAGCSQAPPVRVQGAHTS 178 E SP +G+F RD +GCS P++ A S Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 72,617,871 Number of Sequences: 237096 Number of extensions: 1577135 Number of successful extensions: 3903 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3861 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 4327667848 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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