Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0444
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   100   1e-21
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   100   1e-21
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   100   1e-21
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   100   1e-21
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    71   8e-13
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro...    31   0.63 
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    31   0.63 

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  100 bits (239), Expect = 1e-21
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRR 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y V+  
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS-E 59

Query: 249 LVPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
           L  +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 92



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHR+VN+ Q 
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 433 RXA 441
           R A
Sbjct: 124 RYA 126


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  100 bits (239), Expect = 1e-21
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRR 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y V+  
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS-E 59

Query: 249 LVPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
           L  +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 92



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHR+VN+ Q 
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 433 RXA 441
           R A
Sbjct: 124 RYA 126


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  100 bits (239), Expect = 1e-21
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRR 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y V+  
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS-E 59

Query: 249 LVPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
           L  +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 92



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHR+VN+ Q 
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 433 RXA 441
           R A
Sbjct: 124 RYA 126


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  100 bits (239), Expect = 1e-21
 Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRR 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y V+  
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS-E 59

Query: 249 LVPNQ--CRIMGYGRAVARIPRVRGGGNHXSGK 341
           L  +Q      G GRAVARIPRVRGGG H SG+
Sbjct: 60  LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 92



 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHR+VN+ Q 
Sbjct: 64  QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123

Query: 433 RXA 441
           R A
Sbjct: 124 RYA 126


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 70.9 bits (166), Expect = 8e-13
 Identities = 35/63 (55%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 256 QTSAESWGTDVLSPEFLXXXXXXXXXXXR-SFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
           QTSAESWGT                   + +FGNMCRGGRMFAPTK +RRWHRRVN+ Q 
Sbjct: 2   QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQR 61

Query: 433 RXA 441
           R A
Sbjct: 62  RYA 64


>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
           protein.
          Length = 1953

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 74  SIGSPTFSVGVFREERDGAGCSQAPPVRVQG--AHTSGPG 187
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
           protein.
          Length = 2528

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 74  SIGSPTFSVGVFREERDGAGCSQAPPVRVQG--AHTSGPG 187
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,465,018
Number of Sequences: 53049
Number of extensions: 489564
Number of successful extensions: 1206
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)