Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0444
(482 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) str... 83 1e-16
At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S... 81 4e-16
At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / he... 33 0.13
At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / he... 33 0.13
At1g57750.1 68414.m06552 cytochrome P450, putative similar to cy... 29 1.2
At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / he... 29 1.6
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 29 1.6
At3g22830.1 68416.m02877 heat shock transcription factor family ... 29 2.2
At4g39480.1 68417.m05585 cytochrome P450 family protein contains... 28 2.9
At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF... 28 3.8
At3g51910.1 68416.m05694 heat shock transcription factor family ... 27 5.0
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 27 5.0
At5g60700.1 68418.m07617 glycosyltransferase family protein 2 co... 27 6.6
At5g43840.1 68418.m05360 heat shock transcription factor family ... 27 6.6
At2g26150.1 68415.m03138 heat shock transcription factor family ... 27 6.6
At3g48560.1 68416.m05302 acetolactate synthase, chloroplast / ac... 27 8.8
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 27 8.8
>At3g09630.1 68416.m01142 60S ribosomal protein L4/L1 (RPL4A) strong
similarity to 60S ribosomal protein L1 GB:P49691
Length = 406
Score = 83.0 bits (196), Expect = 1e-16
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Frame = +3
Query: 69 MSLSVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVT 242
M+ + ARPLV++ + + T Q + LP V AP+RPD+VN VH +S NSRQPY V+
Sbjct: 1 MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60
Query: 243 RRL-VPNQCRIMGYGRAVARIPRVRGGGNHXSGK 341
++ G GRAV+RIPRV GGG H +G+
Sbjct: 61 KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ 94
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT +S +FGNMCRGGRMFAPTK WRRWHRRVN+
Sbjct: 66 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMK 125
Query: 433 RXA 441
R A
Sbjct: 126 RHA 128
>At5g02870.1 68418.m00230 60S ribosomal protein L4/L1 (RPL4D) 60S
roibosomal protein L4, Arabidopsis thaliana,
EMBL:CAA79104
Length = 407
Score = 81.0 bits (191), Expect = 4e-16
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +3
Query: 78 SVARPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVTRRL 251
+ ARPLV+V + T Q LP V AP+RPD+VN VH +S NSRQPY V+++
Sbjct: 5 AAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKA 64
Query: 252 -VPNQCRIMGYGRAVARIPRVRGGGNHXSGK 341
G GRAV+RIPRV GGG H +G+
Sbjct: 65 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ 95
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/63 (57%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QTSAESWGTD-VLSPEFLXXXXXXXXXXXRSFGNMCRGGRMFAPTKPWRRWHRRVNLRQX 432
QTSAESWGT +S +FGNMCRGGRMFAPTK WRRWHRRVN+
Sbjct: 67 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMK 126
Query: 433 RXA 441
R A
Sbjct: 127 RHA 129
>At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 377 NIRPPRHMLPKDLXXXXXXXXXXTRNSGDSTSVPHDSALVWDQPPCHAVRLPRVLGHRNV 198
+I PP + +P L N S S ++S +VW P V LP+ H N
Sbjct: 17 SIPPPVNSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNF 76
Query: 197 -XIIDQVRTYG 168
+ Q+ TYG
Sbjct: 77 SSFVRQLNTYG 87
>At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -1
Query: 377 NIRPPRHMLPKDLXXXXXXXXXXTRNSGDSTSVPHDSALVWDQPPCHAVRLPRVLGHRNV 198
+I PP + +P L N S S ++S +VW P V LP+ H N
Sbjct: 17 SIPPPVNSVPPFLSKTYDMVDDPLTNEVVSWSSGNNSFVVWSAPEFSKVLLPKYFKHNNF 76
Query: 197 -XIIDQVRTYG 168
+ Q+ TYG
Sbjct: 77 SSFVRQLNTYG 87
>At1g57750.1 68414.m06552 cytochrome P450, putative similar to
cytochrome P450 GI:4688670 from [Catharanthus roseus]
Length = 497
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 93 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 239
LV +++ SE+++ PLPF K+P +PD++ H + NS+ C+
Sbjct: 351 LVYLHAALSESMR-LYPPLPFNHKSPAKPDVLPSGH-KVDANSKIVICI 397
>At4g17750.1 68417.m02650 heat shock factor protein 1 (HSF1) / heat
shock transcription factor 1 (HSTF1) identical to heat
shock transcription factor 1 (HSF1) SP:P41151 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 495
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 290 STSVPHDSALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG 168
S S ++S +VWD P LP+ H N + Q+ TYG
Sbjct: 71 SWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYG 112
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 287 TSVPHDSALVWDQPPCHAVRLPRVLGHRNVXIIDQV 180
TS+ H W R PR+LGH V +++ +
Sbjct: 48 TSLCHTDVTFWKLDSGPLARFPRILGHEAVGVVESI 83
>At3g22830.1 68416.m02877 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 406
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 290 STSVPHDSALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG 168
S S ++S +VWD LPR H N + Q+ TYG
Sbjct: 80 SWSKSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYG 121
>At4g39480.1 68417.m05585 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 989
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 144 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 239
P+PF K+P +PD++ H + NSR +C+
Sbjct: 384 PVPFNHKSPAKPDVLPSGH-KVKANSRILFCL 414
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 144 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 239
P+PF K+P +PD++ H + NS+ +C+
Sbjct: 857 PVPFQHKSPTKPDVLPSGH-KVDANSKILFCL 887
>At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF21)
identical to heat shock transcription factor 21
[Arabidopsis thaliana] GI:3399765; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 401
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 290 STSVPHDSALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG 168
S S + S +VW+ P LPR H N I Q+ TYG
Sbjct: 34 SWSQSNKSFIVWNPPEFSRDLLPRFFKHNNFSSFIRQLNTYG 75
>At3g51910.1 68416.m05694 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 272
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 269 SALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG--RLEHER 150
S +VWD + LPR H N I Q+ TYG ++E ER
Sbjct: 55 SFVVWDLHSFSTILLPRHFKHSNFSSFIRQLNTYGFRKIEAER 97
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 132 PAPSRSSLNTPTLKVGLPIDSFRYFSEAIPPKY 34
PAPS ++ N + +P+D F E PP Y
Sbjct: 519 PAPSTANGNAGNINSPVPMDPFAASLEVAPPAY 551
>At5g60700.1 68418.m07617 glycosyltransferase family protein 2
contains Pfam profile PF00535: glycosyl transferase,
group 2 family protein
Length = 668
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 358 CRGGRMFAPTKPWRRWHRRVNLRQXRXAXQQPXLLPAS 471
C G +F P K WR ++ +N+R A P +P S
Sbjct: 497 CSWGAVFFP-KQWREFYVYMNMRFTENAKANPVQIPKS 533
>At5g43840.1 68418.m05360 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 282
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 290 STSVPHDSALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG--RLEHER 150
S S ++S +VW+ + LPR H N + Q+ TYG +++ ER
Sbjct: 38 SWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVRQLNTYGFKKIDTER 87
>At2g26150.1 68415.m03138 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 345
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 290 STSVPHDSALVWDQPPCHAVRLPRVLGHRNV-XIIDQVRTYG 168
S S +S +VWD LPR H N I Q+ TYG
Sbjct: 63 SWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYG 104
>At3g48560.1 68416.m05302 acetolactate synthase, chloroplast /
acetohydroxy-acid synthase (ALS) nearly identical to
SP|P17597 Acetolactate synthase, chloroplast precursor
(EC 2.2.1.6, formerly EC 4.1.3.18) (Acetohydroxy-acid
synthase) (ALS) {Arabidopsis thaliana}
Length = 670
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 120 RSSLNTPTLKVGLPIDSFRYFSEAIPPKYTL 28
R+ LN K L SF+ F EAIPP+Y +
Sbjct: 441 RNELNVQKQKFPL---SFKTFGEAIPPQYAI 468
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 287 TSVPHDSALVWDQPPCHAVRLPRVLGHRNVXIIDQV 180
TS+ H W R PR+LGH V +++ +
Sbjct: 50 TSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESI 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,307,909
Number of Sequences: 28952
Number of extensions: 210320
Number of successful extensions: 580
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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