Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0441
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8; ... 192 5e-48
UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; ... 163 3e-39
UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1... 155 1e-36
UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8; ... 111 2e-23
UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia t... 98 2e-19
UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia ... 55 2e-06
UniRef50_A5E0E9 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_O10346 Cluster: Uncharacterized 29.4 kDa protein; n=18;... 41 0.031
UniRef50_Q54HQ9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q7LL06 Cluster: Dubious; n=1; Schizosaccharomyces pombe... 35 2.1
UniRef50_O04004 Cluster: Non-specific lipid-transfer protein pre... 35 2.1
UniRef50_Q0RV52 Cluster: Possible fatty acid-CoA racemase; n=1; ... 33 6.3
UniRef50_A1YZN4 Cluster: Tegument/envelope protein; n=1; Duck en... 33 8.3
UniRef50_A7M484 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_Q4D8M6 Cluster: Putative uncharacterized protein; n=2; ... 33 8.3
>UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8;
n=106; Eukaryota|Rep: Pre-mRNA-processing-splicing factor
8 - Homo sapiens (Human)
Length = 2335
Score = 192 bits (469), Expect = 5e-48
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAYGN
Sbjct: 1658 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN 1717
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
WFPG KPLIQQAMAKIMKANPALY K T P + +N + S
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 1773
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 1774 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 1833
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 1834 GQLAKWKTAEEV 1845
Score = 153 bits (372), Expect = 3e-36
Identities = 83/110 (75%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 1743 LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP 1802
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFNP + H + AGQKRL +TAE+ ALIRSL
Sbjct: 1803 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 1852
>UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; n=1;
Ajellomyces capsulatus NAm1|Rep: Pre-mRNA processing
splicing factor 8 - Ajellomyces capsulatus NAm1
Length = 2739
Score = 163 bits (396), Expect = 3e-39
Identities = 93/190 (48%), Positives = 119/190 (62%), Gaps = 5/190 (2%)
Frame = +2
Query: 5 KYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNW 184
K+WLD+QLR+GDYDSHDIERY RAK+LDYTTD+MSIYPS TGL+I IDLAY +SAYG +
Sbjct: 2062 KFWLDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLAYKPYSAYGQY 2121
Query: 185 FPGCKPLIQQAMAKIMKANPALYGSENVYVK----HCNCILQNLLNLTSPVRTMENCSLI 352
FPG K L+QQAMAKIMKANPALY K + + Q LN + N +
Sbjct: 2122 FPGLKALVQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSNKIQL 2181
Query: 353 KSFGSLMTRMCIV*QFTKPLXGT*QLNPSMEPFLYSIPNWTVFLKIIHTSVWQG-RNAWT 529
+ + R+ I F L T +N ++ F+++ +FLKIIHTSVW G +
Sbjct: 2182 FIDDTNVYRVTIHKTFEGNLT-TKPINGAI--FIFNPRTGQLFLKIIHTSVWAGQKRLGQ 2238
Query: 530 VAKWRLQRSV 559
+AKW+ V
Sbjct: 2239 LAKWKTAEEV 2248
Score = 127 bits (307), Expect = 2e-28
Identities = 71/110 (64%), Positives = 81/110 (73%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLY+SE + +L+SQNY ELFSN+I F+DDTNVYRVTIHKTF NLTTKP
Sbjct: 2146 LRERIRKGLQLYASESNQEFLNSQNYSELFSNKIQLFIDDTNVYRVTIHKTFEGNLTTKP 2205
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFNP + H + AGQKRL +TAE+ ALIRSL
Sbjct: 2206 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 2255
>UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium falciparum 3D7|Rep: Pre-mRNA splicing factor,
putative - Plasmodium falciparum (isolate 3D7)
Length = 3136
Score = 155 bits (375), Expect = 1e-36
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 6/191 (3%)
Frame = +2
Query: 5 KYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNW 184
++W+DIQLRWGD+DSHDIERY+RAKFLDYTTDN+SIYP TG+LI +DLAYNL+SAYGNW
Sbjct: 2356 QFWIDIQLRWGDFDSHDIERYSRAKFLDYTTDNLSIYPCLTGVLIGVDLAYNLYSAYGNW 2415
Query: 185 FPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSFG 364
F KPL+Q+A+ KI+++NP+LY K T P +N + + S
Sbjct: 2416 FNNLKPLMQKALQKIVQSNPSLYVLRERIRKGLQLYSS---EPTEPYLNTQNYNELFSSQ 2472
Query: 365 SLM----TRMCIV*QFTKPLXGT*QLNP-SMEPFLYSIPNWTVFLKIIHTSVWQGRNAWT 529
++ T + V K G P + F+ + +FLKIIHTSVW G+ +
Sbjct: 2473 TIWFVDDTNVYRV-TIHKTFEGNLTTKPINGAIFILNPKTGQLFLKIIHTSVWIGQKRLS 2531
Query: 530 -VAKWRLQRSV 559
+AKW+ V
Sbjct: 2532 QLAKWKTAEEV 2542
Score = 140 bits (340), Expect = 2e-32
Identities = 76/110 (69%), Positives = 84/110 (76%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYL++QNY ELFS+Q IWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 2440 LRERIRKGLQLYSSEPTEPYLNTQNYNELFSSQTIWFVDDTNVYRVTIHKTFEGNLTTKP 2499
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEKCA-LIRSL 576
INGAIFI NP+ + H + GQKRL +TAE+ A LIRSL
Sbjct: 2500 INGAIFILNPKTGQLFLKIIHTSVWIGQKRLSQLAKWKTAEEVASLIRSL 2549
>UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8;
Trypanosomatidae|Rep: PRP8 protein homologue, putative -
Leishmania infantum
Length = 2427
Score = 111 bits (266), Expect = 2e-23
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +2
Query: 5 KYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNW 184
K+W+D+QLRWG+YDSH+I YAR KF +Y+T M YP P G+++AIDLAYN HSA+G W
Sbjct: 1735 KFWIDVQLRWGNYDSHNIAEYARKKFYEYSTARM--YPFPAGIVVAIDLAYNCHSAFGYW 1792
Query: 185 FPGCKPLIQQAMAKIMKANPAL 250
PG KP + + M IMK N L
Sbjct: 1793 IPGMKPFMSKLMPVIMKNNITL 1814
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQI-IWFVDDTNVYRVTIHKTFXXNLTTK 432
LR+R+++ L L+SS PTE LS N ELFS+ + W VDD+ Y + T K
Sbjct: 1817 LRDRMKRDLGLFSSAPTEASLSDTNIAELFSSGMRTWIVDDSATYVTSEQPTPDGGKKFK 1876
Query: 433 PINGAIFIFNPELDSIP*NHPH*CM-AGQKR 522
NGA+ +F P S+ + H + +GQKR
Sbjct: 1877 SENGAVLVFEPVSGSLKMSVVHRSVFSGQKR 1907
>UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia
theta|Rep: Splicing factor Prp8 - Guillardia theta
(Cryptomonas phi)
Length = 2057
Score = 97.9 bits (233), Expect = 2e-19
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +2
Query: 8 YWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNWF 187
YW+D+QLRWGD+DSHDIERY R K+ +Y +YPS G+LIA DL YN++S+YGNW
Sbjct: 1480 YWIDVQLRWGDFDSHDIERYVRMKYYEYNDVKKKLYPSGHGILIAYDLCYNVYSSYGNWI 1539
Query: 188 PGCKPLIQQAMAKIMKANPAL 250
G I+ + K + L
Sbjct: 1540 LGLSNFIKNELFSFHKNSAIL 1560
Score = 36.7 bits (81), Expect = 0.51
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LR RIRK+LQ+Y E S N + F + + VDD+ + + N
Sbjct: 1563 LRSRIRKSLQIYQKNNIESNESILNIDDFFKKKCL-IVDDSCLSNHLELQNLQKNKVINY 1621
Query: 436 INGAIFIFNP 465
+G +FIFNP
Sbjct: 1622 HSGFLFIFNP 1631
>UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_169_4270_455 - Giardia lamblia ATCC
50803
Length = 1271
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/79 (32%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 YWLDIQLRWGDYDS-HDIERYARAKFLDYTTD-NMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+W+D+ L WG+ D+ + +Y++ + YT+D + IY SP G++I IDL Y +AYG+
Sbjct: 532 WWIDLHLTWGNVDTCTSLAKYSKDRHKYYTSDRSRGIYRSPHGIIICIDLLYREIAAYGS 591
Query: 182 WFPGCKPLIQQAMAKIMKA 238
P I +A+++++++
Sbjct: 592 VPTIAIPAINKAISELLES 610
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTE-PYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTK 432
L +RIR L L SS + ++ + G+LF+ ++I VDD+ Y + +
Sbjct: 620 LADRIRTQLGLSSSSVHKLTDITPSSIGDLFTGKVI-IVDDSLAYNFRMLNRDDTRASRA 678
Query: 433 PINGAIFIFNPE 468
ING I IFNP+
Sbjct: 679 IINGFISIFNPQ 690
>UniRef50_A5E0E9 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 150
Score = 54.8 bits (126), Expect = 2e-06
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = -1
Query: 600 YKLLGVSQQ*SN*GTLLCSLHLATV-QAFLPC-HTLVWMILRNTVQFGIEYKNGSIDGFS 427
++L Q+ CSL + Q+ L + V+ + +F I+ K+ +I F
Sbjct: 32 FRLFFTGQRLEQCSDFFCSLPFGKLTQSLLSSPYRGVYNSQKQLTRFWIKDKHTTIYRFG 91
Query: 426 CQVPXKGFVNCYTIHIRVINEPNDLIREQFSIVLTGEVRFSRF*RIQLQCFTYTFSE 256
CQ+ + F+N T+HI VIN+ ++ EQF I++ + FSR +QLQ F+ T S+
Sbjct: 92 CQITFQCFMNSDTVHICVINKQLRIVVEQFGIIIRIQESFSRLCVVQLQPFSNTLSQ 148
>UniRef50_O10346 Cluster: Uncharacterized 29.4 kDa protein; n=18;
Nucleopolyhedrovirus|Rep: Uncharacterized 29.4 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 256
Score = 40.7 bits (91), Expect = 0.031
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KY+ D ++ +Y + + R K++D + D + + LLI A N S Y
Sbjct: 45 DKYFEDPSVKNYEYVKN---LFLRTKYMDDSIDYKNF--NRRVLLIVFKFALNRGSGY-- 97
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLN 310
FP + LI+ A+ ++ K NP L S ++H N L+NL N
Sbjct: 98 -FPSYRELIEVAVKRLNKINPDLKSSPRAMLQHYNECLENLDN 139
>UniRef50_Q54HQ9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 125
Score = 35.5 bits (78), Expect = 1.2
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 VPRLQTSYSTSDGQDNES*SCLVWLRERIRKALQLYSSEPTEPY-LSSQNYGELF 345
VP+ S D DNE +V + ER K+L L + EP + Y LS +NY E F
Sbjct: 28 VPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYF 82
>UniRef50_Q7LL06 Cluster: Dubious; n=1; Schizosaccharomyces
pombe|Rep: Dubious - Schizosaccharomyces pombe (Fission
yeast)
Length = 157
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -3
Query: 118 RIYRHVVCSVIQEFSTSISFDVVRIVITPTKLYIKPVLF 2
R++ HV CSV+ +F+ + FD+ +++ L++ PVLF
Sbjct: 5 RVFEHVHCSVLYKFNNIVKFDLYNVLL--FLLFLLPVLF 41
>UniRef50_O04004 Cluster: Non-specific lipid-transfer protein
precursor; n=1; Ambrosia artemisiifolia|Rep:
Non-specific lipid-transfer protein precursor - Ambrosia
artemisiifolia (Short ragweed)
Length = 118
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 199 FATG-EPVTVCTVQVIGQINGDQQTGR*RIYRHVVCSVIQEFSTSISFDVVRIVITPTKL 23
F TG EP C V +N ++T R+ VC+ I+E + SI++D R+ + TK
Sbjct: 43 FLTGQEPSKACCTGV-NNLNNSRKTKADRV---AVCNCIKELTKSIAYDPKRMPLLSTKC 98
Query: 22 YIKP 11
+KP
Sbjct: 99 GVKP 102
>UniRef50_Q0RV52 Cluster: Possible fatty acid-CoA racemase; n=1;
Rhodococcus sp. RHA1|Rep: Possible fatty acid-CoA
racemase - Rhodococcus sp. (strain RHA1)
Length = 381
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2
Query: 50 HDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYG 178
HDI AR+ FLD TD P P G IA D+A LH+A G
Sbjct: 147 HDINYLARSGFLDQATDAAG-SPVPIGPPIA-DVAAGLHAAVG 187
>UniRef50_A1YZN4 Cluster: Tegument/envelope protein; n=1; Duck
enteritis virus|Rep: Tegument/envelope protein - Duck
enteritis virus
Length = 224
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 12 GLIYSFVGVITILTTSKDMLVL-NSWITLQTTCLYILHL 125
GL+ FVGV I TT+ D + WI + T C+Y + L
Sbjct: 86 GLVCFFVGVFAIPTTAWDTSTCHHGWIGIDTVCVYAVRL 124
>UniRef50_A7M484 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 803
Score = 32.7 bits (71), Expect = 8.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 253 IQGRISFHYLGHRLLNKRFATGEPVTVCTV 164
+Q R+S YLG+ LN RF GE VT T+
Sbjct: 676 MQARVSAGYLGYVFLNSRFTVGEGVTNSTL 705
>UniRef50_Q4D8M6 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 732
Score = 32.7 bits (71), Expect = 8.3
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = -1
Query: 537 LATVQAFLPCHTLVWMILRNTVQFGIEYKNGSIDGFSCQVPXKGFVNCYTIHIRVINEPN 358
L T AF P H+ ++++ R++ GI SI G CQ YT IRV +
Sbjct: 482 LVTSIAFSPSHSSIFLVSRSSGFLGIGDLRQSISGSQCQ---------YTTSIRVTEDAA 532
Query: 357 DLIREQFSIVL 325
I EQ+S +L
Sbjct: 533 FPIPEQYSDIL 543
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,502,107
Number of Sequences: 1657284
Number of extensions: 14028710
Number of successful extensions: 31631
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31610
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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