SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0441
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.9  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    23   6.6  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           23   6.6  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           23   6.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.8  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.8  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   8.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = -3

Query: 652  SRPVHVGSKRPQGSHLSVQIVRCLTAVI*LRHTSLQSPF--SNC 527
            S P+ +GS  P+G     +  +C  A+      SL S F   NC
Sbjct: 1798 SNPIWIGSGTPEGEWAKDEFDKCKDAIDAQYERSLSSGFFIDNC 1841


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
           +AY  W  G +       +KI   N AL  S   +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
           +AY  W  G +       +KI   N AL  S   +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
           +AY  W  G +       +KI   N AL  S   +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 458  SIPNWTVFLKIIHTSV 505
            SIP ++VFL+I+ T+V
Sbjct: 3010 SIPGFSVFLQILSTAV 3025


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 152 AYNLHSAYGNWFPGCKPLIQQAMAKIMKA 238
           AY +    G W P C+P+    +  +  A
Sbjct: 363 AYRVEPGTGRWVPICEPVYSNPINNMKSA 391


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 200 PLIQQAMAKIMKANPALYGSENVYVKHCN 286
           P  ++A+  ++KANPA     +  VK C+
Sbjct: 101 PAFRKAIEPVVKANPAFAKLLDDTVKQCH 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,875
Number of Sequences: 2352
Number of extensions: 16874
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -