BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0441
(672 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 2.9
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 23 6.6
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 23 6.6
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 23 6.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 8.8
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 8.8
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 23 8.8
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 24.6 bits (51), Expect = 2.9
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -3
Query: 652 SRPVHVGSKRPQGSHLSVQIVRCLTAVI*LRHTSLQSPF--SNC 527
S P+ +GS P+G + +C A+ SL S F NC
Sbjct: 1798 SNPIWIGSGTPEGEWAKDEFDKCKDAIDAQYERSLSSGFFIDNC 1841
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 23.4 bits (48), Expect = 6.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
+AY W G + +KI N AL S +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.4 bits (48), Expect = 6.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
+AY W G + +KI N AL S +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.4 bits (48), Expect = 6.6
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 167 SAYGNWFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCN 286
+AY W G + +KI N AL S +V H N
Sbjct: 143 AAYQGWLAGYQVAFDSQKSKITANNFALGYSAGDFVLHTN 182
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.0 bits (47), Expect = 8.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 458 SIPNWTVFLKIIHTSV 505
SIP ++VFL+I+ T+V
Sbjct: 3010 SIPGFSVFLQILSTAV 3025
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.0 bits (47), Expect = 8.8
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = +2
Query: 152 AYNLHSAYGNWFPGCKPLIQQAMAKIMKA 238
AY + G W P C+P+ + + A
Sbjct: 363 AYRVEPGTGRWVPICEPVYSNPINNMKSA 391
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 23.0 bits (47), Expect = 8.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 200 PLIQQAMAKIMKANPALYGSENVYVKHCN 286
P ++A+ ++KANPA + VK C+
Sbjct: 101 PAFRKAIEPVVKANPAFAKLLDDTVKQCH 129
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,875
Number of Sequences: 2352
Number of extensions: 16874
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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