Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0441
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated pro... 193 4e-49
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 192 7e-49
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 192 7e-49
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 192 7e-49
AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated pro... 155 1e-37
BC047720-1|AAH47720.1| 512|Homo sapiens LOXHD1 protein protein. 31 5.0
AK057232-1|BAB71390.1| 457|Homo sapiens protein ( Homo sapiens ... 30 8.7
>AY486134-1|AAS64747.1| 437|Homo sapiens apoptosis-regulated
protein 2 protein.
Length = 437
Score = 193 bits (471), Expect = 4e-49
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAYGN
Sbjct: 157 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN 216
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
WFPG KPLIQQAMAKIMKANPALY K T P + +N + S
Sbjct: 217 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 272
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 273 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNTRTGQLFLKIIHTSVWAGQKRL 332
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 333 GQLAKWKTAEEV 344
Score = 150 bits (364), Expect = 4e-36
Identities = 82/110 (74%), Positives = 86/110 (78%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 242 LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP 301
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFN + H + AGQKRL +TAE+ ALIRSL
Sbjct: 302 INGAIFIFNTRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 351
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 192 bits (469), Expect = 7e-49
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAYGN
Sbjct: 1658 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN 1717
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
WFPG KPLIQQAMAKIMKANPALY K T P + +N + S
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 1773
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 1774 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 1833
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 1834 GQLAKWKTAEEV 1845
Score = 153 bits (372), Expect = 4e-37
Identities = 83/110 (75%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 1743 LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP 1802
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFNP + H + AGQKRL +TAE+ ALIRSL
Sbjct: 1803 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 1852
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 192 bits (469), Expect = 7e-49
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAYGN
Sbjct: 1658 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN 1717
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
WFPG KPLIQQAMAKIMKANPALY K T P + +N + S
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 1773
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 1774 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 1833
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 1834 GQLAKWKTAEEV 1845
Score = 153 bits (372), Expect = 4e-37
Identities = 83/110 (75%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 1743 LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP 1802
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFNP + H + AGQKRL +TAE+ ALIRSL
Sbjct: 1803 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 1852
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 192 bits (469), Expect = 7e-49
Identities = 104/192 (54%), Positives = 125/192 (65%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAYGN
Sbjct: 1658 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN 1717
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
WFPG KPLIQQAMAKIMKANPALY K T P + +N + S
Sbjct: 1718 WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 1773
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 1774 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 1833
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 1834 GQLAKWKTAEEV 1845
Score = 153 bits (372), Expect = 4e-37
Identities = 83/110 (75%), Positives = 87/110 (79%), Gaps = 3/110 (2%)
Frame = +1
Query: 256 LRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFXXNLTTKP 435
LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTF NLTTKP
Sbjct: 1743 LRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKP 1802
Query: 436 INGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*METAEK-CALIRSL 576
INGAIFIFNP + H + AGQKRL +TAE+ ALIRSL
Sbjct: 1803 INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSL 1852
>AY486135-1|AAS64748.1| 436|Homo sapiens apoptosis-regulated
protein 1 protein.
Length = 436
Score = 155 bits (376), Expect = 1e-37
Identities = 86/130 (66%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Frame = +1
Query: 196 QTSYSTSDGQDNES*SCLVWLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD 375
Q ++T + ++ L LRERIRK LQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD
Sbjct: 221 QAFHTTGQAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDD 280
Query: 376 TNVYRVTIHKTFXXNLTTKPINGAIFIFNPELDSIP*NHPH*CM-AGQKRLDS-C*META 549
TNVYRVTIHKTF NLTTKPINGAIFIFNP + H + AGQKRL +TA
Sbjct: 281 TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA 340
Query: 550 EK-CALIRSL 576
E+ ALIRSL
Sbjct: 341 EEVAALIRSL 350
Score = 150 bits (364), Expect = 4e-36
Identities = 90/192 (46%), Positives = 112/192 (58%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 EKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGN 181
+KYW+DIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG+LIAIDLAYNLHSAY
Sbjct: 157 QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYET 216
Query: 182 WFPGCKPLIQQAMAKIMKANPALYGSENVYVKHCNCILQNLLNLTSPVRTMENCSLIKSF 361
+ AKIMKANPALY K T P + +N + S
Sbjct: 217 GSQQ-QAFHTTGQAKIMKANPALYVLRERIRKGLQLYSS---EPTEPYLSSQNYGELFS- 271
Query: 362 GSLMTRMCIV*QFTKPLXGT*QLNPSMEP-----FLYSIPNWTVFLKIIHTSVWQG-RNA 523
++ + + + T + N + +P F+++ +FLKIIHTSVW G +
Sbjct: 272 NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL 331
Query: 524 WTVAKWRLQRSV 559
+AKW+ V
Sbjct: 332 GQLAKWKTAEEV 343
>BC047720-1|AAH47720.1| 512|Homo sapiens LOXHD1 protein protein.
Length = 512
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 552 LCSLHLATVQAFLPCHTLVWMILRNTVQFGIEYKNGSIDGFSCQVPXK 409
LC HLA F+P LVW + T+ +EY N C +P K
Sbjct: 319 LCVGHLAREDRFIPKRELVWHVKTITIT-EMEYGNVYFFNCDCLIPLK 365
>AK057232-1|BAB71390.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ32670 fis, clone TESTI1000127, weakly similar to
POLYCYSTIN PRECURSOR. ).
Length = 457
Score = 29.9 bits (64), Expect = 8.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 552 LCSLHLATVQAFLPCHTLVWMILRNTVQFGIEYKNGSIDGFSCQVPXK 409
LC HLA F+P L W + T+ +EY N + C +P K
Sbjct: 319 LCVGHLAREDRFIPKRELAWHVKTITIT-EMEYGNVYLFNCDCLIPLK 365
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,046,536
Number of Sequences: 237096
Number of extensions: 2163426
Number of successful extensions: 3701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3695
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -