Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0441
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   2.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.5  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    22   4.6  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   4.6  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 471 QFGIEYKNGSIDGFS 427
           +FG EYKNG I G S
Sbjct: 93  EFGKEYKNGFIKGQS 107


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 495 WMILRNTVQFGIEYKNGSIDGFSCQ 421
           W I  N   F   Y N +I+GF+ Q
Sbjct: 210 WRITHNFFYFDPRYGNYNINGFNFQ 234


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 21  YSFVGVITILTTS 59
           YS++GV+T++ TS
Sbjct: 641 YSYIGVLTLVATS 653


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -3

Query: 223 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 125
           GHR   K   TG     C V ++    G+ + G
Sbjct: 21  GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 53


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -3

Query: 223 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 125
           GHR   K   TG     C V ++    G+ + G
Sbjct: 37  GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 69


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -3

Query: 223 GHRLLNKRFATGEPVTVCTVQVIGQINGDQQTG 125
           GHR   K   TG     C V ++    G+ + G
Sbjct: 94  GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,660
Number of Sequences: 438
Number of extensions: 4365
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)