Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0438
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 146 1e-35
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 97 1e-20
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 89 4e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 1e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 63 2e-10
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 37 0.016
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 36 0.038
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 36 0.038
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 35 0.050
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.27
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.27
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.61
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.61
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.81
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.81
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 1.1
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 1.1
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 1.9
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 29 3.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 3.3
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 7.6
At5g27600.1 68418.m03305 AMP-binding protein, putative similar t... 28 7.6
At5g18380.1 68418.m02162 40S ribosomal protein S16 (RPS16C) 28 7.6
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 28 7.6
At2g09990.1 68415.m01037 40S ribosomal protein S16 (RPS16A) Same... 28 7.6
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+I APGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDST 504
HALLAFTLGVKQ+I NKMD+T
Sbjct: 136 HALLAFTLGVKQMICCCNKMDAT 158
Score = 139 bits (337), Expect = 2e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+I APGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDST 504
HALLAFTLGVKQ+I NKMD+T
Sbjct: 136 HALLAFTLGVKQMICCCNKMDAT 158
Score = 139 bits (337), Expect = 2e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+I APGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDST 504
HALLAFTLGVKQ+I NKMD+T
Sbjct: 136 HALLAFTLGVKQMICCCNKMDAT 158
Score = 139 bits (337), Expect = 2e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 256 ALWKFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
ALWKFET+KYY T+I APGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTRE
Sbjct: 76 ALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 135
Query: 436 HALLAFTLGVKQLIVGVNKMDST 504
HALLAFTLGVKQ+I NKMD+T
Sbjct: 136 HALLAFTLGVKQMICCCNKMDAT 158
Score = 139 bits (337), Expect = 2e-33
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +2
Query: 32 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 211
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 212 DKLKAERELGITIDM 256
DKLKAERE GITID+
Sbjct: 61 DKLKAERERGITIDI 75
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/77 (58%), Positives = 55/77 (71%)
Frame = +1
Query: 268 FETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 447
FET TI+ APGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH L
Sbjct: 174 FETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQL 233
Query: 448 AFTLGVKQLIVGVNKMD 498
A TLGV +LIV VNKMD
Sbjct: 234 AKTLGVSKLIVVVNKMD 250
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/72 (41%), Positives = 51/72 (70%)
Frame = +2
Query: 41 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 220
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 221 KAERELGITIDM 256
+ ER G T+++
Sbjct: 158 EEERLKGKTVEV 169
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 268 FETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHAL 444
F + +++V ++ +PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA
Sbjct: 312 FNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHAR 371
Query: 445 LAFTLGVKQLIVGVNKMD 498
+ GV+Q+IV +NKMD
Sbjct: 372 VLRGFGVEQVIVAINKMD 389
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +2
Query: 47 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 226
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 227 ERELGITI 250
ERE GIT+
Sbjct: 298 ERERGITM 305
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +1
Query: 265 KFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET + + PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 136 EYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 188
Query: 445 LAFTLGVKQLIVGVNKMDSTE 507
LA +GV ++V +NK D +
Sbjct: 189 LAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 29 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 163
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 265 KFETSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 444
++ET+K + + PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 445 LAFTLGVKQLIVGVNKMD 498
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 38 KEKTHINIVVIGHVDSGKSTTT 103
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 36.7 bits (81), Expect = 0.016
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +1
Query: 286 YVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 465
+V+ + PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 466 KQLIVGVNKMD-STEHHTVSPD*GIRRKYPHTQKIGTTSVXFRAILXDGTTVELQQMLXK 642
K +I+ NK+D E+ + I+R +T G V A L V + ++ K
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITNTNAEGAPIVPVSAQLKYNIDVLCEYIVKK 233
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 274 TSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 453
T + +V+ + PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 454 TLGVKQLIVGVNKMD 498
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 274 TSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 453
T + +V+ + PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 454 TLGVKQLIVGVNKMD 498
+ +K +I+ NK+D
Sbjct: 178 MMRLKHIIILQNKID 192
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.1 bits (77), Expect = 0.050
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +1
Query: 268 FETSKY----YVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 435
FE SK +V+ + PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 436 HALLAFTLGVKQLIVGVNKMD 498
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGG 130
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 283 YYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
Y + +I +PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 44 KTHINIVVIGHVDSGKSTTTGHLIYKCG 127
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.5 bits (68), Expect = 0.61
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 236 LGITIDMLSGSSKLASTMLPSXM-LLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 412
GITI + + + P + L+DT S E R +A C L V S+ V
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 190
Query: 413 LRTV 424
+T+
Sbjct: 191 AQTL 194
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 298 IXAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 474
I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 475 IVGVNKMDSTEHHTVSPD*GIRRK 546
+ +DS E V + + ++
Sbjct: 286 NLSTFTLDSDEEDEVREESNVAKE 309
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.1 bits (67), Expect = 0.81
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 236 LGITI 250
GITI
Sbjct: 117 KGITI 121
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.1 bits (67), Expect = 0.81
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 235
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 236 LGITI 250
GITI
Sbjct: 117 KGITI 121
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 274 TSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y I+ PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 274 TSKYYVTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+ Y I+ PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 289 VTIIXAPGHRDFIKNMITGTSQADCAVLIVAAGTG 393
+T + PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 381 SYDEHSAISLRGSCDHVLDEISVSRSXNDGNIVLASFELPESISIVIPSSRSAFSLSN 208
++D+HS +L+ D + D + ++ N+VL F P+ ++ + +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 56 NIVVIGHVDSGKSTTTGHLIYKCG 127
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 20 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 139
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At5g27600.1 68418.m03305 AMP-binding protein, putative similar to
AMP-binding protein (MF39P) gi:1617274 from Brassica
napus, long-chain-fatty-acid--CoA ligase - Brassica
napus, EMBL:Z72152; contains Pfam AMP-binding enzyme
domain PF00501
Length = 700
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -2
Query: 506 SVESILLTPTMSCLTPRVKA--SKACSRV*PFLEIPASNSPVPA 381
++E+ LLTPT P+ KA ++A S++ + EI ASN P+P+
Sbjct: 658 TLENGLLTPTFKIKRPQAKAYFAEAISKM--YAEIAASN-PIPS 698
>At5g18380.1 68418.m02162 40S ribosomal protein S16 (RPS16C)
Length = 146
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 669 SAVALRHCILXKHLLKLNCCPV 604
+AVA+ HC L+KLN CP+
Sbjct: 18 TAVAVTHCKRGSGLIKLNGCPI 39
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 471 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSXN 298
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNN 768
>At2g09990.1 68415.m01037 40S ribosomal protein S16 (RPS16A) Same as
GB:Q42340
Length = 146
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 669 SAVALRHCILXKHLLKLNCCPV 604
+AVA+ HC L+KLN CP+
Sbjct: 18 TAVAVTHCKRGSGLIKLNGCPI 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,732,728
Number of Sequences: 28952
Number of extensions: 287071
Number of successful extensions: 828
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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