Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0437
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    91   9e-18
UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted ...    32   5.7  
UniRef50_A6CA26 Cluster: Glucokinase; n=1; Planctomyces maris DS...    31   9.9  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 91.1 bits (216), Expect = 9e-18
 Identities = 48/71 (67%), Positives = 48/71 (67%)
 Frame = -3

Query: 412 DAPCSGALSAAGVVVTRSVXXXXXXXXXXXXXXXXXXXXXXXAGFPRQALNRGLPLGFRF 233
           DAPCSGALSAAGVVVTRSV                       AGFPRQALNRGLPLGFRF
Sbjct: 2   DAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPLGFRF 61

Query: 232 SALRHLDPKKL 200
           SALRHLDPKKL
Sbjct: 62  SALRHLDPKKL 72


>UniRef50_Q5CYC7 Cluster: Uncharacterized protein with predicted
           coiled coil regions; n=2; Cryptosporidium|Rep:
           Uncharacterized protein with predicted coiled coil
           regions - Cryptosporidium parvum Iowa II
          Length = 825

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 68  DRDRVECCSSLEQESTIKERGLQRQRAKNRL 160
           +RD V  C S+ Q+S IKER L+ ++ K +L
Sbjct: 128 ERDNVSKCLSIRQQSLIKERELRLEKTKLKL 158


>UniRef50_A6CA26 Cluster: Glucokinase; n=1; Planctomyces maris DSM
           8797|Rep: Glucokinase - Planctomyces maris DSM 8797
          Length = 342

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 90  VPVWNKSPLLKNVDSNVKGRKTVYQGD 170
           +P W   P+ + V  +  G+KT+YQ D
Sbjct: 95  LPTWKDFPIRQTVSDHYSGKKTIYQND 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,273,402
Number of Sequences: 1657284
Number of extensions: 6800150
Number of successful extensions: 14495
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14492
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)