Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0437
         (426 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g57380.1 68418.m07169 fibronectin type III domain-containing ...    30   0.75 
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb...    29   1.00 
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa...    28   3.0  
At1g64960.1 68414.m07363 expressed protein                             27   4.0  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   4.0  
At1g73290.1 68414.m08481 serine carboxypeptidase S10 family prot...    27   5.3  
At5g24280.1 68418.m02856 expressed protein ; expression supporte...    27   7.0  
At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.0  

>At5g57380.1 68418.m07169 fibronectin type III domain-containing
           protein / PHD finger protein-related contains Pfam
           profiles PF00041: Fibronectin type III domain, PF00628:
           PHD-finger
          Length = 600

 Score = 29.9 bits (64), Expect = 0.75
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 68  DRDRVECCSSLEQESTIKERGLQRQRAKNRLSGR 169
           D+D  E CS+ E ES ++E  L +++A N++ GR
Sbjct: 434 DKDNTEHCSAGEVESELEEERLVKRKA-NKIDGR 466


>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
           (RbohE) / NADPH oxidase nearly identical to respiratory
           burst oxidase protein E GI:3242787 [gi:3242787] from
           [Arabidopsis thaliana]
          Length = 926

 Score = 29.5 bits (63), Expect = 1.00
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 124 TWTPTSK--GEKPSIRAMAHYVNHHPNQVFWGRGAVK 228
           T TPTS   G+K +++A  ++V   P  V W RG ++
Sbjct: 777 TATPTSTHGGKKKAVKAHFYWVTREPGSVEWFRGVME 813


>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
           family protein similar to C-terminal zinc-finger
           [Glycine max] GI:558543; contains Pfam profile: PF00097
           zinc finger, C3HC4 type (RING finger)
          Length = 486

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 130 TPTSKGEKPSIRAMAHYVNHHP 195
           T +S+   PS+    HY++HHP
Sbjct: 260 TSSSRNPTPSVYQRNHYISHHP 281


>At1g64960.1 68414.m07363 expressed protein
          Length = 1168

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 216 RCRKALNRNPKGSPRF 263
           RCR  +NRNPK   RF
Sbjct: 552 RCRTLINRNPKAGARF 567


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +2

Query: 56   IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 151
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


>At1g73290.1 68414.m08481 serine carboxypeptidase S10 family protein
           similar to serine carboxypeptidase I precursor
           (SP:P07519) [Hordeum vulgare]; glucose acyltransferase
           GB:AAD01263 [Solanum berthaultii]; contains Pfam
           profile: PF00450 Serine carboxypeptidase;
          Length = 438

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 115 SGLLFQTGTTLNPISVYSFDL*GILPISAYWLK 17
           SGLLF+ G     + VY+  L  ++P +  W K
Sbjct: 91  SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTK 123


>At5g24280.1 68418.m02856 expressed protein ; expression supported
           by MPSS
          Length = 1634

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 117 IVDSCSKLEQHSTLSRSILLIYKGFC 40
           I+D  SKLE  S+LS  I +I  G C
Sbjct: 691 IIDGISKLEVQSSLSLPITIIDSGKC 716


>At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 90  VPVWNKSPLLKNVDSNVKGRKT 155
           VPVW   P+LK+ D  V  R T
Sbjct: 248 VPVWPVGPVLKSPDKKVGSRST 269


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,902,900
Number of Sequences: 28952
Number of extensions: 147615
Number of successful extensions: 341
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 665183504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)