Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0434
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 149 7e-35
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 145 1e-33
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 122 1e-26
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 80 7e-14
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 78 2e-13
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 75 3e-12
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 74 4e-12
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 60 6e-08
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 57 5e-07
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 53 7e-06
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 49 1e-04
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 48 3e-04
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 4e-04
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 43 0.007
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 43 0.009
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 41 0.029
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 41 0.029
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 41 0.038
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 41 0.038
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 39 0.12
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 39 0.15
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 37 0.47
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 37 0.62
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.62
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 37 0.62
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 1.1
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 36 1.1
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 36 1.1
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 35 1.9
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 35 1.9
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 35 1.9
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 35 2.5
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 34 3.3
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 34 3.3
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 34 3.3
UniRef50_Q966Q2 Cluster: T-box containing transcription factor; ... 34 4.4
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 34 4.4
UniRef50_Q1DAP4 Cluster: Response regulator; n=3; Cystobacterine... 33 7.7
UniRef50_A4R267 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 149 bits (361), Expect = 7e-35
Identities = 77/135 (57%), Positives = 88/135 (65%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR SL G ++VLM K
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
K + R + E+L E+RD L NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 451 VVIPAHNTGLGPEKT 495
V +PA NTGLGPEKT
Sbjct: 121 VTVPAQNTGLGPEKT 135
Score = 39.9 bits (89), Expect = 0.067
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 446 CQSSFPP-TTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEAT 604
C+ + P T ++ F L I TKIS+GTIEI++DV ++K ++ +SEAT
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEAT 173
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 145 bits (351), Expect = 1e-33
Identities = 76/135 (56%), Positives = 87/135 (64%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR SL G ++VLM K
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
K + R + E+L EVRD L NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 451 VVIPAHNTGLGPEKT 495
V +PA NTGLGPEKT
Sbjct: 121 VTVPAQNTGLGPEKT 135
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 446 CQSSFPP-TTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEAT 604
C+ + P T ++ F L I TKIS+GTIEI++DV ++KP ++ +SEAT
Sbjct: 119 CEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEAT 173
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 122 bits (293), Expect = 1e-26
Identities = 61/135 (45%), Positives = 82/135 (60%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIR SL G + +LM K
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
K + + + E++V++R+ L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 451 VVIPAHNTGLGPEKT 495
V +PA NTGLGPEKT
Sbjct: 121 VFVPASNTGLGPEKT 135
Score = 40.7 bits (91), Expect = 0.038
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +2
Query: 485 QRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEAT 604
++ F LSI TKIS+GTIEI+++VH++K ++ +SEAT
Sbjct: 133 EKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASEAT 173
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 79.8 bits (188), Expect = 7e-14
Identities = 52/139 (37%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR L G S+VLM K
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 271 XAKP----SKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAI 438
+ S+ + T N + + +L EV + + KV APAR G +
Sbjct: 61 MKRSVRIHSENSGNT--AILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLV 118
Query: 439 APLSVVIPAHNTGLGPEKT 495
AP+ VV+ NTGL P +T
Sbjct: 119 APIDVVVQPGNTGLDPSQT 137
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/41 (43%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDN--NPALEKLLPHIKGNVGFVVTRGE 371
GKNTM +++++ H +N N A+ LLP ++GNVG + T+G+
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGD 96
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEA 601
P T + F L+IPTKI+KGT+EII V ++K ++ SSEA
Sbjct: 127 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEA 174
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = +1
Query: 106 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPS 285
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR L G S+VLM K +
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 286 K--TTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVI 459
+ T Q + + + +L EV + + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 460 PAHNTGLGPEKT 495
NTGL P +T
Sbjct: 127 QPGNTGLDPSQT 138
Score = 41.5 bits (93), Expect = 0.022
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDN--NPALEKLLPHIKGNVGFVVTRGE 371
GKNTM +++++ H D N A LLP ++GNVG + T+G+
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGD 97
Score = 37.9 bits (84), Expect = 0.27
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEA 601
P T + F L+IPTKI+KGT+EII V ++K ++ SSEA
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEA 175
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 74.5 bits (175), Expect = 3e-12
Identities = 44/135 (32%), Positives = 65/135 (48%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR L G+ +M K
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
K K T + + +L +++ E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 451 VVIPAHNTGLGPEKT 495
V++PA +TGL P +T
Sbjct: 128 VIVPAGDTGLDPTQT 142
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDNNPALEKLLPHIKGNVGFVVTRGE 371
GKNT+ RKAIK+ + P LE+LLPHIKGNVGF+ T+G+
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGD 101
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 73.7 bits (173), Expect = 4e-12
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
M + K K Y K+ L+ +Y K IV DNVGS QM +R SL G + +LM K
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQA-PARPGAIAPL 447
K + + + ++L E+R+ L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 448 SVVIPAHNTGLGPEKT 495
V IP TG+ P T
Sbjct: 121 DVFIPPGPTGMDPSHT 136
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = +1
Query: 118 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTTW 297
K + K +L Y K + AD VGS Q+Q+IR S+ G VLM K K +
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDL- 67
Query: 298 TTIQPSRNCCHT-SRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNT 474
+P + +T + +N+ EV+ +V APA+ G AP V+IPA T
Sbjct: 68 ADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPT 127
Query: 475 GLGPEKT 495
G+ P +T
Sbjct: 128 GMEPTQT 134
Score = 39.1 bits (87), Expect = 0.12
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 497 FLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEAT 604
FL L I TKI++G I+I+N+VHI+K ++ +SEAT
Sbjct: 136 FLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEAT 172
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 56.8 bits (131), Expect = 5e-07
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ* 270
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR L + +L+
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 271 XAKPSKTTWTTIQPSRNCCHTSRATLAS----WSPAENLV--------------EVRDNX 396
K T P + + A S +N V +++
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 397 LENKVQAPARPGAIAPLSVVIPAHNTGLGP 486
ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDP 150
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 473 PASVQRRLFLPGLSIPTKISKGTIEIINDVHILK 574
PAS+Q F L IPTKI KG I+I D +LK
Sbjct: 150 PASIQ---FFHALQIPTKIEKGQIQITKDFVVLK 180
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 53.2 bits (122), Expect = 7e-06
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Frame = +1
Query: 91 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSL-XGSSIVLM-EKT 264
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R L +S++LM E T
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 265 -------Q*XAKPSKT---------TWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNX 396
+ +KP ++ TWT I + L +L +++D
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 397 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 495
+ +APAR G++A V I A TGL P++T
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQT 153
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 48.8 bits (111), Expect = 1e-04
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Frame = +1
Query: 118 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXG-SSIVLMEKT------Q*XA 276
K Y + L +Y + DNV SQQ+ +R L G +V+ +KT + A
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 277 KPSKTTW-------TTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGA 435
+ K + T I+ C +T+ P + V D +++VQAPAR GA
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPV--ITAVLD---KHRVQAPARVGA 122
Query: 436 IAPLSVVIPAHNTGLGPEKT 495
IAP V++PA NTG+ P+ T
Sbjct: 123 IAPCDVIVPAGNTGMEPKAT 142
Score = 33.1 bits (72), Expect = 7.7
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 497 FLPGLSIPTKISKGTIEIINDVHILKPVTRL-SSEAT 604
F L+I TKI+KGT+EI++D +L R+ +S AT
Sbjct: 144 FFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTAT 180
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 47.6 bits (108), Expect = 3e-04
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Frame = +1
Query: 118 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEK------------ 261
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R L + +L K
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 262 TQ*XAKPS-----KTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPAR 426
T+ A+ K TWT + R + + EV E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 427 PGAIAPLSVVIPAHNTGLGPEKT 495
G IAP V + TG+ P +T
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQT 145
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/129 (21%), Positives = 54/129 (41%)
Frame = +1
Query: 100 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAK 279
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M + +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 280 PSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVI 459
+ + +A+ L + +N +K AP G +AP +V+
Sbjct: 70 ALEEAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLEN---SKTPAPINAGEVAPNDIVV 126
Query: 460 PAHNTGLGP 486
P +TG+ P
Sbjct: 127 PEGDTGIDP 135
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 264 TMXRKAIKDHLDNNPALEKLLPHIKGNVGFVVTRGE 371
++ ++AI+ HL+ N L KLLPHIK VGFV T+G+
Sbjct: 689 SIHQQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGD 724
Score = 40.7 bits (91), Expect = 0.038
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 509 LSIPTKISKGTIEIINDVHILK 574
LSIP KISKGTIEIINDV ILK
Sbjct: 739 LSIPIKISKGTIEIINDVPILK 760
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 42.7 bits (96), Expect = 0.009
Identities = 37/128 (28%), Positives = 47/128 (36%)
Frame = -3
Query: 512 KGLEERVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNXLSRTSTRFSAGDHEANVALD 333
K ++ V G PVL A +GA AP AGA TL S S + + L
Sbjct: 12 KAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTKPTLPLT 71
Query: 332 VWQQFLEGWIVVQVVFDGFAXHCVFSMSTILEPXSXXRICCICCEPTLSAPTMKHFGYSS 153
F + + + T P + CIC E TLS PT YSS
Sbjct: 72 KGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSS 131
Query: 152 KSWMILTK 129
K + L K
Sbjct: 132 KYSLNLAK 139
Score = 41.9 bits (94), Expect = 0.017
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = -1
Query: 361 VTTKPTLPLMCGNSFSRAGLLSRWSLMALRIIVFFP 254
V TKPTLPL GN+FS++G + LMAL +VF P
Sbjct: 62 VKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLP 97
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 41.1 bits (92), Expect = 0.029
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Frame = +1
Query: 103 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKP 282
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++ K K
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 283 SKTTWTTIQPSRNC-----CHTSRATLASWSP--AENLVEVRDN----XLENKVQ----- 414
+ + + LAS P + V N L+ K++
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 415 APARPGAIAPLSVVIPAHNTGLGPEK 492
APAR G +A V+IP TG+ P +
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQ 152
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 41.1 bits (92), Expect = 0.029
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +1
Query: 94 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXG-SSIVLMEKT- 264
G E K A WK ++ +L+DEY +V + + + Q+Q+IR L +I+ M +
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 265 --Q*XAKPSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAI 438
+ + ++P + A + + L ++ + E+K APA+PG I
Sbjct: 72 LMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLE---ESKASAPAKPGDI 128
Query: 439 APLSVVIPAHNTGLGPEKTLS 501
AP +V+P T P +S
Sbjct: 129 APEDIVVPEGPTPFEPGPIVS 149
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 40.7 bits (91), Expect = 0.038
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDNNPALEKLLPHIKGNVGFVVTRGEP 374
GKNT+ +K ++D L N+ ++L I GNV F+ T +P
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDP 94
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 40.7 bits (91), Expect = 0.038
Identities = 31/124 (25%), Positives = 54/124 (43%)
Frame = +1
Query: 115 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTT 294
WK I LL Y + +GS+Q+Q+IR G +++ + K A+
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIAR--SFG 68
Query: 295 WTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNT 474
+ + + A + + A L +V + + K+ AP + GA+AP+ +VI T
Sbjct: 69 GSGMNDMVDFIDDQMALIFTDLDAFALYKVLE---KGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 475 GLGP 486
L P
Sbjct: 126 SLRP 129
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 39.1 bits (87), Expect = 0.12
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +1
Query: 109 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLME-KTQ*XAKPS 285
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M K
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 286 KTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPA 465
+ ++ + A + + L ++ + ++K +APA+ G+IAP +V+PA
Sbjct: 65 NSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILE---DSKTEAPAKAGSIAPADIVVPA 121
Query: 466 HNTGLGP 486
+T P
Sbjct: 122 GDTSFPP 128
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 38.7 bits (86), Expect = 0.15
Identities = 34/129 (26%), Positives = 53/129 (41%)
Frame = +1
Query: 106 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPS 285
K + Y K+ + L EY K +V DNV S Q+ QIR L G + +L K +
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR-- 66
Query: 286 KTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPA 465
+N + +A + + + K +A A+ G +AP VVI
Sbjct: 67 VINQLDDDKLKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 466 HNTGLGPEK 492
T GP++
Sbjct: 127 MLTQSGPDQ 135
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILK 574
P T + + F L I TKI+KG IEI+N V+++K
Sbjct: 126 PMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIK 163
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 37.1 bits (82), Expect = 0.47
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +1
Query: 55 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLX 234
K RS TL++ ++ K+ F + Q LD + +I N+ + +++IR
Sbjct: 3 KSRRSKVLTLAQTEKKGHEG-KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWK 61
Query: 235 GSSIVLMEKTQ*XAK-----PSKTTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXL 399
GS I M KT+ AK P + + H + L + S + ++ ++ +
Sbjct: 62 GSRI-FMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFV 120
Query: 400 ENKVQAPARPGAIAPLSVVIPA 465
+N AR GA+AP + VIPA
Sbjct: 121 QNDF---ARAGAVAPFTHVIPA 139
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 370 NLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLSS-RPFYP 519
+L EV + KV APAR G ++ + V++P NTGL T +S +P P
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGLDLAHTRASIKPISP 684
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 370 NLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLSS-RPFYP 519
+L EV + + KV APAR G +A + V++P NT L T +S +P P
Sbjct: 37 DLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLNLAHTRASXKPISP 87
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 36.7 bits (81), Expect = 0.62
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 400 ENKVQAPARPGAIAPLSVVIPAHNTGLGP 486
+N+ APA+PGA+ P VV+PA T L P
Sbjct: 105 QNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 370 NLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLSS-RPFYP 519
+L E + + KV APA G +A + V++P NTGL T +S +P P
Sbjct: 78 DLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLNLAHTRASIKPISP 128
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 400 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLS 501
+NK+ AR G IA + VV+PA NTG+ P L+
Sbjct: 104 KNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLT 137
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 35.9 bits (79), Expect = 1.1
Identities = 29/119 (24%), Positives = 49/119 (41%)
Frame = +1
Query: 145 QLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTTWTTIQPSRNC 324
+LL +YP F+ + S+ + + R L ++ + K + I P+
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGI-PAE-I 86
Query: 325 CHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLS 501
R + + + N EV EN V+ A+PG AP +V+PA T P +S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIIS 145
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 415 APARPGAIAPLSVVIPAHNTGLGPEKTLSS 504
APA+PG +A +V+PA +TGL P LS+
Sbjct: 118 APAKPGDVAQSEIVVPAGDTGLTPGPILST 147
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 498 KSLLWTEAGVVGGNDD*QWGNGTRTSWSLDFV 403
+SL W GV G N D WGN T + WS + V
Sbjct: 191 RSLTWFHTGVDGENPDIFWGNSTSSGWSGNLV 222
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 367 ENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLS 501
EN ++ ++N V+ A+PG + +++PA NTG+ P LS
Sbjct: 104 ENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLS 148
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 34.7 bits (76), Expect = 2.5
Identities = 28/124 (22%), Positives = 53/124 (42%)
Frame = +1
Query: 115 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTT 294
WK + +I + ++E+ +V + + Q+QQIR +L G++ V M +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNEL 70
Query: 295 WTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNT 474
++ + A + + EN ++ + K + A+PG AP +VIP T
Sbjct: 71 GGSVATLNDHAEGQSALIFT---NENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 475 GLGP 486
P
Sbjct: 128 SFKP 131
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 358 SPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKT 495
S EN+ ++ +E+KV P + G IAP +VIP N +GP +T
Sbjct: 85 STNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQT 132
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 34.3 bits (75), Expect = 3.3
Identities = 30/130 (23%), Positives = 46/130 (35%)
Frame = +1
Query: 115 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTT 294
WK + L YP I + Q+Q++R L + + K + + +
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 295 WTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNT 474
L + A L + D K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLTGQNLLLFTHMNAFELSLLLDKY---KAKTYYKPGEIAQQEIVIPEGNT 131
Query: 475 GLGPEKTLSS 504
GL P LS+
Sbjct: 132 GLSPGPILST 141
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 400 ENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTLS 501
+NK AR G IA + V +PA NTG+ P L+
Sbjct: 90 KNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLT 123
>UniRef50_Q966Q2 Cluster: T-box containing transcription factor;
n=68; Chordata|Rep: T-box containing transcription
factor - Ciona intestinalis (Transparent sea squirt)
Length = 808
Score = 33.9 bits (74), Expect = 4.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 409 VQAPARPGAIAPLSVVIPAHN-TGLGPEKTLSSRPFYP 519
+Q +PG I+PL V+ A+N +G+ P + S PF+P
Sbjct: 26 IQDSMKPGPISPLQAVMSAYNHSGMMPSRPGSDLPFFP 63
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 46 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRX 225
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 226 SLXGSSIVLMEKTQ 267
S+ G + + M K Q
Sbjct: 69 SMKGYARIFMGKNQ 82
>UniRef50_Q1DAP4 Cluster: Response regulator; n=3;
Cystobacterineae|Rep: Response regulator - Myxococcus
xanthus (strain DK 1622)
Length = 927
Score = 33.1 bits (72), Expect = 7.7
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 310 PSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLSVVIPAHNTGLGPE 489
PS T +LAS PA +VE + E APA PG +AP + P + P
Sbjct: 596 PSAPLASTVEPSLASSVPAPAVVETQP--AEPAATAPATPGEVAPDASAKPTDAGVVTPV 653
Query: 490 KTLSSRPFYP 519
K+ + P P
Sbjct: 654 KSADAAPVAP 663
>UniRef50_A4R267 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 669
Score = 33.1 bits (72), Expect = 7.7
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 293 PGQQSSPRETVATHQGQRWLRGHPRRTSLRSVTXCWRTKSKLQLVLVPLPHCQSSFPPTT 472
P SP+E T ++WL P RT RS++ +K + L PLP PP+T
Sbjct: 210 PATPPSPKELGKTIHTKKWLASIPNRT--RSLSP---SKDDISRRLGPLPPIPKKTPPST 264
Query: 473 P 475
P
Sbjct: 265 P 265
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,076,628
Number of Sequences: 1657284
Number of extensions: 16365019
Number of successful extensions: 45258
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 43349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45217
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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