Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0434
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 83 2e-16
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 83 2e-16
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 83 2e-16
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 33 0.25
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 32 0.43
08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589 30 1.7
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 30 1.7
01_01_0650 - 4948852-4950012 30 2.3
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 29 4.0
06_01_0350 + 2534422-2535615 29 4.0
08_02_1369 - 26445725-26445812,26446443-26446529,26446720-264469... 29 5.3
04_04_1097 - 30859963-30860302,30862130-30863058 29 5.3
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 28 7.0
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 28 7.0
06_01_0351 + 2537022-2538281 28 7.0
02_05_1164 + 34628391-34628663,34628763-34628816,34628906-346291... 28 7.0
06_03_1027 + 27000498-27000503,27001325-27002271,27002359-27002698 28 9.3
02_01_0553 - 4078792-4079131,4079846-4080771 28 9.3
01_01_0269 + 2223683-2224060 28 9.3
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 83.4 bits (197), Expect = 2e-16
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 97 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XA 276
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLM K
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 277 KPSK--TTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
+ K T + + +L EVR+ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 451 VVIPAHNTGLGPEKT 495
VV+P NTGL P +T
Sbjct: 124 VVVPPGNTGLDPSQT 138
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDN--NPALEKLLPHIKGNVGFVVTRGE 371
GKNT+ R+ IK H DN N +L+P + GNVG + T+G+
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGD 97
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRLSS 595
P T + F L+IPTKI+KGT+EII V ++K ++ S
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 83.4 bits (197), Expect = 2e-16
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 97 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XA 276
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLM K
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 277 KPSK--TTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
+ K T + + +L EVR+ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 451 VVIPAHNTGLGPEKT 495
VV+P NTGL P +T
Sbjct: 124 VVVPPGNTGLDPSQT 138
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDN--NPALEKLLPHIKGNVGFVVTRGE 371
GKNT+ R+ IK H DN N +L+P + GNVG + T+G+
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGD 97
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRLSS 595
P T + F L+IPTKI+KGT+EII V ++K ++ S
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 83.4 bits (197), Expect = 2e-16
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 97 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XA 276
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR L G SIVLM K
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 277 KPSK--TTWTTIQPSRNCCHTSRATLASWSPAENLVEVRDNXLENKVQAPARPGAIAPLS 450
+ K T + + +L EVR+ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 451 VVIPAHNTGLGPEKT 495
VV+P NTGL P +T
Sbjct: 124 VVVPPGNTGLDPSQT 138
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 255 GKNTMXRKAIKDHLDN--NPALEKLLPHIKGNVGFVVTRGE 371
GKNT+ R+ IK H DN N +L+P + GNVG + T+G+
Sbjct: 57 GKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGD 97
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 461 PPTTPASVQRRLFLPGLSIPTKISKGTIEIINDVHILKPVTRLSS 595
P T + F L+IPTKI+KGT+EII V ++K ++ S
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 160 YPKCFI--VGADNVGSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTTWTTIQPSRNCC 327
Y KC I VG DN+ Q MQQ R SL I+ E P+K T + +Q C
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEILKPENLIWAVSPAKLTISEVQDVSPYC 1349
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 413 WTLFSNX-LSRTSTRFSAGDHEANVALDVWQQFLEGWIVVQVVFDGFAXH 267
W +S ++ T F G+HEA+ L W+ + GW + F GFA H
Sbjct: 171 WKYYSGQAVAPYPTIFIGGNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589
Length = 310
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -1
Query: 523 GRDR--KAWKKESSLDRGRCCGR 461
GRD W + SLDR RCCGR
Sbjct: 272 GRDPYFACWSEPGSLDRSRCCGR 294
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 GSQQMQQIRXSLXGSSIVLMEKTQ*XAKPSKTTWTTIQPSRNCCHTSRATL-ASWSPAEN 372
GS + +V+ KT +P K PSR S A + +SW ++
Sbjct: 61 GSHRAMAASSKKSTKQVVVAAKTTTGHRPKKAAAAPTTPSRGAPSASAAPVSSSWEQLKS 120
Query: 373 LVEVRDNXLENKVQAPARPGA 435
L+ R +V PA P +
Sbjct: 121 LLSCRSATAAARVHDPAAPSS 141
>01_01_0650 - 4948852-4950012
Length = 386
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 PGQQSSPRETVATHQGQRWLRGHPRRTSLRS-VTXCWRTKSKLQLVLVPLPHCQSSFPPT 469
P QQSSPR ++ + + RR + S +T + S ++ P S PP
Sbjct: 181 PAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKSPPSESPPL 240
Query: 470 TP--ASVQRRLFLPGLSIP 520
+P A+ RR PG+ P
Sbjct: 241 SPDGAAAIRRGSWPGVGSP 259
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 55 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLX 234
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 235 GSSIVLM 255
SS + +
Sbjct: 63 SSSRIFL 69
>06_01_0350 + 2534422-2535615
Length = 397
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +2
Query: 350 LRGHPRRTSLRSVTXCWRTKSKLQLVLVPLPHCQSSFPP----TTP-ASVQRRLFLPG 508
L H R LR+V WR+ ++L+ L+P P P T P + RRL +PG
Sbjct: 27 LPSHGDRVRLRAVCRPWRSSARLERKLLPPPLPWLFLPDGAFLTLPDGAAHRRLAIPG 84
>08_02_1369 -
26445725-26445812,26446443-26446529,26446720-26446928,
26447501-26447583,26447672-26447720,26447800-26447959,
26448795-26448891,26449424-26449535,26449637-26449702,
26450135-26450206,26450413-26450487,26451139-26451266,
26451551-26451772,26452084-26452355,26452447-26452543,
26452633-26452738,26454834-26455220
Length = 769
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -3
Query: 368 SAGDHEANVALDVWQQFLEGWIVVQVVFDGFAXHCV 261
S G H A + W FLEGW V F+G A H V
Sbjct: 344 SNGGH-AGRNCERWSPFLEGWNSPAVQFEGPAVHVV 378
>04_04_1097 - 30859963-30860302,30862130-30863058
Length = 422
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 609 QHVNILHLIXLCKQDMIWNICTE-SXSTEXRQF 704
+H NI+ I C++ M+W I TE + RQF
Sbjct: 198 RHPNIVKFIGACRKPMVWCIVTEYAKGGSVRQF 230
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 67 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRXSLXGSSI 246
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 247 VLM 255
+ +
Sbjct: 203 IFL 205
>06_03_0908 -
25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 585 G*VLKPPSQHVNILHLIXLCKQDMIWNICTESXSTEXRQFNW 710
G ++ P QH L L + +W+ C E+ QF+W
Sbjct: 608 GLLVDPHDQHAIADALYKLLSEKQLWSKCRENGLKNIHQFSW 649
>06_01_0351 + 2537022-2538281
Length = 419
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 350 LRGHPRRTSLRSVTXCWRTKSKLQLVLVPLP 442
L H R LR+V WR+ ++++L L+P P
Sbjct: 59 LPSHADRVRLRAVCRPWRSSARVELDLLPPP 89
>02_05_1164 +
34628391-34628663,34628763-34628816,34628906-34629197,
34629316-34629764
Length = 355
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 440 PHCQSSFPPTTPASVQRRLFLPGLSIPTKISKGTIEI 550
P SS PP++ R L GLS P +S G++E+
Sbjct: 176 PPPPSSSPPSSVHGSSGRYLLSGLSSPQSMSDGSLEL 212
>06_03_1027 + 27000498-27000503,27001325-27002271,27002359-27002698
Length = 430
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 609 QHVNILHLIXLCKQDMIWNICTE-SXSTEXRQF 704
+H NI+ I C++ ++W I TE + RQF
Sbjct: 206 RHPNIVRFIGACRKSIVWCIITEYAKGGSVRQF 238
>02_01_0553 - 4078792-4079131,4079846-4080771
Length = 421
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 609 QHVNILHLIXLCKQDMIWNICTE-SXSTEXRQF 704
+H NI+ I C++ ++W I TE + RQF
Sbjct: 197 RHPNIVRFIGACRKSIVWCIITEYAKGGSVRQF 229
>01_01_0269 + 2223683-2224060
Length = 125
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 307 QPSRNCCHTSRATLASWS 360
+P+ CC +RA+LASW+
Sbjct: 57 RPALRCCRETRASLASWT 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,833,949
Number of Sequences: 37544
Number of extensions: 484092
Number of successful extensions: 1313
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1310
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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