Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0433
         (662 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952...    30   1.4  
08_02_0009 + 11216532-11218687,11220727-11225998                       30   1.4  
08_02_0003 + 11180421-11180757,11180773-11185715                       30   1.4  
08_02_0002 + 11173365-11173512,11173528-11178470                       30   1.4  
11_04_0057 - 12953479-12954364,12954484-12955034,12955125-129553...    29   2.5  
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048...    29   2.5  
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    28   7.6  

>11_03_0065 -
           9522478-9525335,9525513-9526028,9526432-9527247,
           9527440-9527767
          Length = 1505

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = -3

Query: 321 EVHPLGGRFESSHQNIELLHCLQNSSANALSPDFLQCNAAALNSA*RFNIACSFCCLXGV 142
           EV  +   +ESS + ++L+  L       +  D L C    +     +NI C+FC     
Sbjct: 609 EVETINEEYESSDEELDLIDELAGLKVEMM--DQLNCEHDWIRGKGDYNIKCAFCIYYPS 666

Query: 141 RVSSVWCKL 115
           + + V C +
Sbjct: 667 QENRVTCSI 675


>08_02_0009 + 11216532-11218687,11220727-11225998
          Length = 2475

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = -3

Query: 321  EVHPLGGRFESSHQNIELLHCLQNSSANALSPDFLQCNAAALNSA*RFNIACSFCCLXGV 142
            EV  +   +ESS + ++L+  L       +  D L C    +     +NI C+FC     
Sbjct: 1574 EVETINEEYESSDEELDLIDELAGLKVEMM--DQLNCEHDWIRGKGDYNIKCAFCIYYPS 1631

Query: 141  RVSSVWCKL 115
            + + V C +
Sbjct: 1632 QENRVTCSI 1640


>08_02_0003 + 11180421-11180757,11180773-11185715
          Length = 1759

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = -3

Query: 321  EVHPLGGRFESSHQNIELLHCLQNSSANALSPDFLQCNAAALNSA*RFNIACSFCCLXGV 142
            EV  +   +ESS + ++L+  L       +  D L C    +     +NI C+FC     
Sbjct: 858  EVETINEEYESSDEELDLIDELAGLKVEMM--DQLNCEHDWIRGKGDYNIKCAFCIYYPS 915

Query: 141  RVSSVWCKL 115
            + + V C +
Sbjct: 916  QENRVTCSI 924


>08_02_0002 + 11173365-11173512,11173528-11178470
          Length = 1696

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = -3

Query: 321 EVHPLGGRFESSHQNIELLHCLQNSSANALSPDFLQCNAAALNSA*RFNIACSFCCLXGV 142
           EV  +   +ESS + ++L+  L       +  D L C    +     +NI C+FC     
Sbjct: 795 EVETINEEYESSDEELDLIDELAGLKVEMM--DQLNCEHDWIRGKGDYNIKCAFCIYYPS 852

Query: 141 RVSSVWCKL 115
           + + V C +
Sbjct: 853 QENRVTCSI 861


>11_04_0057 -
           12953479-12954364,12954484-12955034,12955125-12955342,
           12957514-12957678,12960562-12960898
          Length = 718

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 398 FCICSSAFGLLRVAATDSKVGKSAKSKSIPSVVVLKAVTRT--SNCF 264
           F I SS+FG+L+ A  D +VG         S+ + + +T T  S C+
Sbjct: 477 FLIQSSSFGVLQAATMDRRVGTKKFQLPAGSISIFEIITFTIWSGCY 523


>02_05_0897 +
           32603060-32603387,32604348-32604589,32604681-32604824,
           32604889-32605050,32605129-32605212,32605528-32605601,
           32605850-32606039,32606120-32606275,32606368-32606465,
           32606976-32607102,32607193-32607292,32607402-32607572,
           32607790-32607838,32607912-32608003,32608705-32608774,
           32608999-32609023,32609059-32609293,32609425-32609525,
           32609614-32609865
          Length = 899

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = -3

Query: 624 WQLVPGTPSRXRAVAPXPGTAYNAPHTTSFDEL----PSSFA 511
           WQ +PGTP      AP PG+ +      SF +     PSS+A
Sbjct: 701 WQSMPGTPVPQPHEAPTPGSGWAVTPGVSFGDASGKNPSSYA 742


>06_03_0867 +
           25534760-25539620,25540662-25540857,25540957-25541104,
           25541673-25541751,25542151-25542238,25542330-25542600,
           25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 30  IPGVYQXRKNHRPVYRNQRSHHCLHRELKAYTKQTIPSP 146
           +P  +    +H P  R Q  HH  H++L A T    P P
Sbjct: 59  LPDHHHHHHHHHPPPRVQHHHHHHHQQLPAPTPPPPPPP 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,400,134
Number of Sequences: 37544
Number of extensions: 349721
Number of successful extensions: 1115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)