Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0433
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical ...    31   0.55 
U40947-4|AAZ32798.1|  883|Caenorhabditis elegans Anion/bicarbona...    29   2.2  
U40947-3|AAZ32797.1|  956|Caenorhabditis elegans Anion/bicarbona...    29   2.2  
AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion transpo...    29   2.2  
AY887906-1|AAX34418.1|  956|Caenorhabditis elegans anion transpo...    29   2.2  
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom...    29   2.9  
AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical ...    28   5.1  
U53338-1|AAA96189.2|  152|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical
           protein Y73B3A.1 protein.
          Length = 659

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 404 ENQHQRRLQPPRTDHRLDGGRSFTTEASLFSATRVKAKEDGNSSK 538
           +NQ +RR+ PP+++  L   R   TEA   +  +VK KE     K
Sbjct: 397 KNQRKRRVVPPKSEPVLSAKRVRATEAKKKAVEKVKEKEKKEQRK 441


>U40947-4|AAZ32798.1|  883|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 4, isoform b protein.
          Length = 883

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 558 NAPHTTSFDELPSSFALTLVAENKLASVVKLLP 460
           N P TT+FD+L S  ++T   E  LA  V + P
Sbjct: 329 NPPATTTFDQLKSPDSITKAIERFLAGTVVIAP 361


>U40947-3|AAZ32797.1|  956|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 4, isoform a protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 558 NAPHTTSFDELPSSFALTLVAENKLASVVKLLP 460
           N P TT+FD+L S  ++T   E  LA  V + P
Sbjct: 329 NPPATTTFDQLKSPDSITKAIERFLAGTVVIAP 361


>AY954522-1|AAX34430.1|  936|Caenorhabditis elegans anion
           transporter ABTS-4b protein.
          Length = 936

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 558 NAPHTTSFDELPSSFALTLVAENKLASVVKLLP 460
           N P TT+FD+L S  ++T   E  LA  V + P
Sbjct: 329 NPPATTTFDQLKSPDSITKAIERFLAGTVVIAP 361


>AY887906-1|AAX34418.1|  956|Caenorhabditis elegans anion
           transporter ABTS-4a protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 558 NAPHTTSFDELPSSFALTLVAENKLASVVKLLP 460
           N P TT+FD+L S  ++T   E  LA  V + P
Sbjct: 329 NPPATTTFDQLKSPDSITKAIERFLAGTVVIAP 361


>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
           homeobox protein 44,isoform a protein.
          Length = 1273

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 363 PQEPKGR*TNAKFRRTNTSVDSSLRGLITASTVEEALRQRLA 488
           P +P     N +F   +T   SSL G    STVE  L+QR++
Sbjct: 783 PVKPTATGGNRRFSSNSTYESSSLTGKSRPSTVELILKQRIS 824


>AL032625-4|CAB63350.2|  792|Caenorhabditis elegans Hypothetical
           protein Y37H9A.3 protein.
          Length = 792

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 155 QQKLQAILKRQAEFKAAALHCK 220
           Q +L+ +L+RQA+FK AA+H +
Sbjct: 451 QGQLEFLLERQAQFKQAAIHVR 472


>U53338-1|AAA96189.2|  152|Caenorhabditis elegans Hypothetical
           protein C05E11.6 protein.
          Length = 152

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 246 SSFEDSEAVRCSGDCFQNDHRGDGLR-FSRFTYFGVGRRDPQEP 374
           S F  +  V C  DCFQND     ++ FSR     V + +P  P
Sbjct: 88  SHFAPNTRVECRKDCFQNDTFQSCMKIFSRVPSRPVQQPEPTAP 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,478,737
Number of Sequences: 27780
Number of extensions: 256511
Number of successful extensions: 719
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)