Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0432
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_36729| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 38 0.007
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 34 0.15
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 30 2.4
SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012) 29 3.2
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 29 4.2
SB_57805| Best HMM Match : Myotub-related (HMM E-Value=4.2) 29 4.2
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 9.8
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_3940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_13735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 99 bits (238), Expect = 2e-21
Identities = 47/69 (68%), Positives = 52/69 (75%)
Frame = +3
Query: 312 PAPARGEVVRQIGDALRENLQPLGKLVSLXMGKILPEAIGEVIEYIHVCDLALGLSRTLP 491
P P RGEVVRQIG ALRE L PLGKL+SL +GKI PE +GE+ EYI VCD A+GLSR
Sbjct: 70 PGPKRGEVVRQIGHALREKLTPLGKLLSLEVGKIFPEGVGEIQEYIDVCDYAVGLSRMFD 129
Query: 492 GTVFPSSVP 518
G VFPS P
Sbjct: 130 GKVFPSERP 138
Score = 67.7 bits (158), Expect = 1e-11
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = +2
Query: 503 PVERPGHVLIXKWNPLGVVGIITAFNFPVAVFGMDSAIA 619
P ERPGH L+ +WNP+G VG+ITAFNFPVAVFG ++AI+
Sbjct: 134 PSERPGHALLEQWNPVGTVGVITAFNFPVAVFGWNTAIS 172
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 83 STAFLIEDPKYSFLKDLXLKENNVGVFNGKWKANGEVIKSYSPANGKVIAEV 238
S A LIE+ KYS+L++L LK +N GV+NG W GE + P G+V+ ++
Sbjct: 33 SGALLIENEKYSWLRELGLKADNPGVYNGTWGGKGE---TPGPKRGEVVRQI 81
>SB_36729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 83 STAFLIEDPKYSFLKDLXLKENNVGVFNGKWKANGE 190
S A LIE+ KYS+L++L LK +N GV+NG W GE
Sbjct: 33 SGALLIENEKYSWLRELGLKADNPGVYNGTWGGKGE 68
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/106 (27%), Positives = 48/106 (45%)
Frame = +3
Query: 315 APARGEVVRQIGDALRENLQPLGKLVSLXMGKILPEAIGEVIEYIHVCDLALGLSRTLPG 494
A R ++R+ D + EN+ + K+++L GK L EA GEV+ + + ++ + G
Sbjct: 4 AKERSIILRKWYDLILENIDDIAKIITLESGKPLLEARGEVLYAANYIEFFSEEAKRVYG 63
Query: 495 TVFPSSVPDTS*SXNGTRLVLLAS*QPSTFLWLFLGWIALSLXFCG 632
+ PS+ P + + AS P F L A S CG
Sbjct: 64 DIIPSNNPGQKVLITKEPVGVCASITPWNFPIAMLVRKASSAIACG 109
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 500 VPVERPGHVLIXKWNPLGVVGIITAFNFPVAVFGMDSAIAXVLWVTQLFXXPSXKQTP 673
+P PG ++ P+GV IT +NFP+A+ ++ A T + PS QTP
Sbjct: 66 IPSNNPGQKVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCT-MIARPSG-QTP 121
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 512 RPGHVLIXKWNPLGVVGIITAFNFPVA 592
RPG + + P+GVVGIIT +NFP A
Sbjct: 130 RPGIEIETRREPVGVVGIITPWNFPTA 156
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 500 VPVERPGHVLIXKWNPLGVVGIITAFNFPVAVFGMDSAIA 619
+P + P + P+GVVG IT +NFP+ + G+ A A
Sbjct: 1323 IPADGP-FFTYTRHEPVGVVGAITPWNFPLLMEGLKLAPA 1361
>SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012)
Length = 281
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 53 YIRVPMARNASTAFLIEDPKYSFLKDLXLKENNVGVFNGKWKANG 187
YIR P ARNA + E+ + D E N G + +WK NG
Sbjct: 21 YIRNPAARNACKQYGFEECIIEWTMD----EKNCGGLSAQWKDNG 61
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 318 ARAVPPTHATLPVPHW--RTPHNRALP--ACTSAITLPFAGL*DLITSPFAFHFPLKTPT 151
A +VP LP P R PH R+ P A T G + +P A + P+
Sbjct: 63 ASSVPSFGVELPTPRTSARNPHQRSPPLQAWTEKGLFYQRGPTSVKVAPLALYLQGYDPS 122
Query: 150 LFSFKXKSFKNEY 112
LF+F F+N +
Sbjct: 123 LFNFICNGFRNGF 135
>SB_57805| Best HMM Match : Myotub-related (HMM E-Value=4.2)
Length = 167
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 300 THATLPVPHWRTPHNRALPACTSAITLPFA 211
T+ TLP+ H T H + C+++ TLP +
Sbjct: 75 TYHTLPISHCATYHTLPISHCSTSYTLPIS 104
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 500 VPVERPGHVLIXKWNPLGVVGIITAFNFPVAVFGMDSAIAXVLWVTQLFXXPSXKQTP 673
+P + P + + + P+G+VG IT +NFP+ + + IA L + +QTP
Sbjct: 453 IPADGP-YFVYTRHEPVGLVGAITPWNFPLNMASV--KIAPALACGNVVILKPAEQTP 507
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 564 MPTTPSGFHXSIRTCP-GRSTGTQYRGVCGTDPKLSHTREYTRSL 433
MPT P+G S +CP G CG DP +S T++ S+
Sbjct: 756 MPTGPTGSDLSCYSCPRGSKCDNVTVQRCGVDPLVSVTQDRCLSM 800
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 324 LQARAVPPTHATLPVPHWRTPHNRA 250
L+ +++ P A +P P+W+ P N+A
Sbjct: 859 LRLQSLNPARAAIPYPYWQYPGNQA 883
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 539 WNPLGVVGIITAFNFPV 589
W P+GVVG I +NFP+
Sbjct: 765 WKPVGVVGGIVPWNFPL 781
>SB_3940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 283 RKRGMRGRNCPRLQEARSLD 342
RKR ++G N P +QE RS D
Sbjct: 8 RKRTLKGENRPEIQETRSYD 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,426,378
Number of Sequences: 59808
Number of extensions: 447786
Number of successful extensions: 943
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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