BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0431
(483 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled ... 23 4.2
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 7.3
>AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled
receptor 4 protein.
Length = 426
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 326 VLLCCSPRRCPGKRFPIVTGWXRSRRRIPFAGA 228
VL+C S RC +P+ R R +I GA
Sbjct: 167 VLVCVSLDRCFAVIYPLRVSAARKRGKIMLGGA 199
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 22.6 bits (46), Expect = 7.3
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -1
Query: 450 PIVQPXLVKGLSXEQESHQRXFLGRSTAXRS*IGVWRXTTNGSPLLFSTPMS 295
P+ P + GL+ E+ RST+ + T + PL+ PM+
Sbjct: 596 PLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPETPSDQPLIKEVPMN 647
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,048
Number of Sequences: 2352
Number of extensions: 5792
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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