Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0431
         (483 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...    31   0.33 
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...    31   0.33 
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    29   1.3  
U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine recept...    29   1.3  
U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine recept...    29   1.3  
U40422-2|AAA81445.1|  137|Caenorhabditis elegans Neuropeptide-li...    27   9.4  

>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score = 31.5 bits (68), Expect = 0.33
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +1

Query: 166 YFQYPTPELQXELKKXAQAIVAPAKGILRRERXQPVTMGKRL 291
           Y Q+ T   + EL+  A AIV P KGIL  +     +M KRL
Sbjct: 4   YSQFLTKAQEDELRSIANAIVTPGKGILAADE-STGSMDKRL 44


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 0.33
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +1

Query: 166 YFQYPTPELQXELKKXAQAIVAPAKGILRRERXQPVTMGKRL 291
           Y Q+ T   + EL+  A AIV P KGIL  +     +M KRL
Sbjct: 4   YSQFLTKAQEDELRSIANAIVTPGKGILAADE-STGSMDKRL 44


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 136 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LFPA 35
           ++DR L K+ ENL+L    VS L +  L+ LF A
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLFAA 64


>U97549-3|AAO91737.1|  402|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformb protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 136 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LFPA 35
           ++DR L K+ ENL+L    VS L +  L+ LF A
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLFAA 64


>U97549-2|AAO91738.1|  399|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformc protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 136 MYDRRLFKRKENLYLTD*KVSTLYLRALI*LFPA 35
           ++DR L K+ ENL+L    VS L +  L+ LF A
Sbjct: 31  LWDRSLRKQPENLFLVSLAVSDLLVSVLVMLFAA 64


>U40422-2|AAA81445.1|  137|Caenorhabditis elegans Neuropeptide-like
           protein protein23 protein.
          Length = 137

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 296 PGKRFPIVTGWXRSRRRIPFA 234
           PGKR     GW R +R +PFA
Sbjct: 105 PGKR-AFAAGWNRGKRSMPFA 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,726,832
Number of Sequences: 27780
Number of extensions: 132044
Number of successful extensions: 247
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)