Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0430
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    32   0.64 
AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcriptio...    31   1.5  
AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p pro...    29   6.0  
AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA...    29   6.0  

>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +2

Query: 17   PDAQKMKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDN--AVEKSXQIYED 190
            P  Q+ +  Q +  +  A+  A   S S+SK EDD+  S          A +K  Q  ED
Sbjct: 1752 PQQQQQQQQQPVTPVSAATAPAATPSSSESK-EDDVSASSTTTPTTRTPAKDKPKQSRED 1810

Query: 191  KKSEVITNVVNKLIRNNKMNCRXTPTSSGCK 283
            +K E I   + K+ +      + T  SSG K
Sbjct: 1811 RKLEAILRAIEKMEKQEARGKKDTRQSSGGK 1841


>AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcription
           factor dRFX2 protein.
          Length = 841

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +2

Query: 41  VQVILCLFVASLYANGTS--VSDSKLEDDLYNSILVADYDNAVEKSXQIYEDKKSEVI 208
           ++VI  +     +++G+S  +S+   +D  YN     D++N +E+S  I ++KK ++I
Sbjct: 666 IRVITAIRKVIFFSSGSSKLLSNFSNKDVFYNEWHSLDFENIIEESFLIPDEKKPQII 723


>AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 29  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 127
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 29  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 127
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,607,865
Number of Sequences: 53049
Number of extensions: 378730
Number of successful extensions: 1346
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)